Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Mir6401-201ENSMUST00000184499 109 ntBASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Gm28141-201ENSMUST00000186676 342 ntBASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Gm28877-201ENSMUST00000191349 604 ntBASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Gm5552-201ENSMUST00000197149 515 ntBASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Gm18388-201ENSMUST00000222339 557 ntBASIC3.3□□□□□ -1.88
Col4a6B1AVK5 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.29□□□□□ -1.88
Col4a6B1AVK5 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.29□□□□□ -1.88
Col4a6B1AVK5 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col4a6B1AVK5 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col4a6B1AVK5 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Col4a6B1AVK5 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col4a6B1AVK5 Gm5754-201ENSMUST00000118774 892 ntBASIC3.29□□□□□ -1.88
Col4a6B1AVK5 Gm6797-201ENSMUST00000119440 512 ntBASIC3.29□□□□□ -1.88
Col4a6B1AVK5 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.29□□□□□ -1.88
Col4a6B1AVK5 Gm26028-201ENSMUST00000158660 294 ntBASIC3.29□□□□□ -1.88
Col4a6B1AVK5 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col4a6B1AVK5 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.29□□□□□ -1.88
Col4a6B1AVK5 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.29□□□□□ -1.88
Col4a6B1AVK5 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.29□□□□□ -1.88
Col4a6B1AVK5 Gm10242-201ENSMUST00000090064 330 ntBASIC3.29□□□□□ -1.88
Col4a6B1AVK5 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Col4a6B1AVK5 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col4a6B1AVK5 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col4a6B1AVK5 Gm38212-201ENSMUST00000194081 2756 ntBASIC3.28□□□□□ -1.88
Col4a6B1AVK5 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col4a6B1AVK5 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col4a6B1AVK5 Gm24122-201ENSMUST00000104107 132 ntBASIC3.28□□□□□ -1.88
Col4a6B1AVK5 Gm26342-201ENSMUST00000104557 129 ntBASIC3.28□□□□□ -1.88
Col4a6B1AVK5 Gm11456-201ENSMUST00000121070 256 ntBASIC3.28□□□□□ -1.88
Col4a6B1AVK5 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC3.28□□□□□ -1.88
Col4a6B1AVK5 Gm27505-201ENSMUST00000185071 110 ntBASIC3.28□□□□□ -1.88
Col4a6B1AVK5 Gm6140-201ENSMUST00000192494 966 ntBASIC3.28□□□□□ -1.88
Col4a6B1AVK5 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.28□□□□□ -1.88
Col4a6B1AVK5 Gm43892-201ENSMUST00000204373 265 ntBASIC3.28□□□□□ -1.88
Col4a6B1AVK5 Gm44688-201ENSMUST00000209083 537 ntBASIC3.28□□□□□ -1.88
Col4a6B1AVK5 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
Col4a6B1AVK5 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col4a6B1AVK5 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col4a6B1AVK5 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col4a6B1AVK5 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col4a6B1AVK5 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
Col4a6B1AVK5 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col4a6B1AVK5 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.28□□□□□ -1.89
Col4a6B1AVK5 Gm38240-201ENSMUST00000195110 2487 ntBASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Gm14518-201ENSMUST00000117351 542 ntBASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Gm14576-201ENSMUST00000118073 1111 ntBASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Gm11363-201ENSMUST00000121672 548 ntBASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Gm12226-201ENSMUST00000144172 876 ntBASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Gm20651-201ENSMUST00000177219 329 ntBASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Gm18748-201ENSMUST00000198507 622 ntBASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC3.27□□□□□ -1.89
Col4a6B1AVK5 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Col4a6B1AVK5 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Mir344c-201ENSMUST00000103919 92 ntBASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Gm22532-201ENSMUST00000158822 140 ntBASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Mir8096-201ENSMUST00000184526 127 ntBASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Gm18692-201ENSMUST00000193047 511 ntBASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Gm44016-201ENSMUST00000203463 164 ntBASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Col4a6B1AVK5 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Gm23136-201ENSMUST00000083425 99 ntBASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Col4a6B1AVK5 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Col4a6B1AVK5 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.26□□□□□ -1.89
Col4a6B1AVK5 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.26□□□□□ -1.89
Col4a6B1AVK5 AC115034.1-201ENSMUST00000215393 3846 ntBASIC3.26□□□□□ -1.89
Col4a6B1AVK5 AC156632.1-201ENSMUST00000220626 3845 ntBASIC3.26□□□□□ -1.89
Col4a6B1AVK5 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col4a6B1AVK5 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC3.26□□□□□ -1.89
Col4a6B1AVK5 Gm2033-201ENSMUST00000210753 2287 ntBASIC3.26□□□□□ -1.89
Col4a6B1AVK5 Gm11387-201ENSMUST00000120266 772 ntBASIC3.26□□□□□ -1.89
Col4a6B1AVK5 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Col4a6B1AVK5 Gm25866-201ENSMUST00000158245 112 ntBASIC3.26□□□□□ -1.89
Col4a6B1AVK5 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Col4a6B1AVK5 Gm44376-201ENSMUST00000197570 128 ntBASIC3.26□□□□□ -1.89
Col4a6B1AVK5 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.26□□□□□ -1.89
Col4a6B1AVK5 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.26□□□□□ -1.89
Col4a6B1AVK5 Gm21112-201ENSMUST00000212224 578 ntBASIC3.26□□□□□ -1.89
Col4a6B1AVK5 Gm7760-201ENSMUST00000212265 578 ntBASIC3.26□□□□□ -1.89
Col4a6B1AVK5 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.26□□□□□ -1.89
Col4a6B1AVK5 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Col4a6B1AVK5 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 109.9 ms