Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col6a4A2AX52 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Col6a4A2AX52 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC2.6□□□□□ -1.99
Col6a4A2AX52 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC2.6□□□□□ -1.99
Col6a4A2AX52 Gm36927-201ENSMUST00000192504 1841 ntBASIC2.6□□□□□ -1.99
Col6a4A2AX52 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Col6a4A2AX52 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col6a4A2AX52 Gm23766-201ENSMUST00000103894 80 ntBASIC2.59□□□□□ -1.99
Col6a4A2AX52 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC2.59□□□□□ -1.99
Col6a4A2AX52 Gm28920-201ENSMUST00000189957 699 ntBASIC2.59□□□□□ -1.99
Col6a4A2AX52 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.59□□□□□ -1.99
Col6a4A2AX52 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC2.59□□□□□ -1.99
Col6a4A2AX52 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.59□□□□□ -1.99
Col6a4A2AX52 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.59□□□□□ -1.99
Col6a4A2AX52 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Col6a4A2AX52 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
Col6a4A2AX52 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Col6a4A2AX52 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Col6a4A2AX52 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Col6a4A2AX52 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Col6a4A2AX52 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC2.59□□□□□ -2
Col6a4A2AX52 Mir1946a-201ENSMUST00000158360 134 ntBASIC2.59□□□□□ -2
Col6a4A2AX52 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC2.59□□□□□ -2
Col6a4A2AX52 Gm18560-201ENSMUST00000173463 1123 ntBASIC2.59□□□□□ -2
Col6a4A2AX52 Mir6401-201ENSMUST00000184499 109 ntBASIC2.59□□□□□ -2
Col6a4A2AX52 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC2.59□□□□□ -2
Col6a4A2AX52 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.59□□□□□ -2
Col6a4A2AX52 CT025680.1-201ENSMUST00000217375 375 ntBASIC2.59□□□□□ -2
Col6a4A2AX52 AC129219.3-201ENSMUST00000223790 196 ntBASIC2.59□□□□□ -2
Col6a4A2AX52 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC2.59□□□□□ -2
Col6a4A2AX52 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Col6a4A2AX52 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Col6a4A2AX52 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col6a4A2AX52 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col6a4A2AX52 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC2.58□□□□□ -2
Col6a4A2AX52 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC2.58□□□□□ -2
Col6a4A2AX52 Gm3370-201ENSMUST00000171785 500 ntBASIC2.58□□□□□ -2
Col6a4A2AX52 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC2.58□□□□□ -2
Col6a4A2AX52 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC2.58□□□□□ -2
Col6a4A2AX52 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC2.58□□□□□ -2
Col6a4A2AX52 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC2.58□□□□□ -2
Col6a4A2AX52 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Col6a4A2AX52 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col6a4A2AX52 Gm42455-201ENSMUST00000199761 2736 ntBASIC2.58□□□□□ -2
Col6a4A2AX52 Gm7470-201ENSMUST00000194219 2095 ntBASIC2.58□□□□□ -2
Col6a4A2AX52 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC2.58□□□□□ -2
Col6a4A2AX52 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Col6a4A2AX52 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col6a4A2AX52 Mir1903-201ENSMUST00000122574 80 ntBASIC2.58□□□□□ -2
Col6a4A2AX52 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC2.58□□□□□ -2
Col6a4A2AX52 Gm16327-201ENSMUST00000137146 228 ntBASIC2.58□□□□□ -2
Col6a4A2AX52 Mir5123-201ENSMUST00000177794 83 ntBASIC2.58□□□□□ -2
Col6a4A2AX52 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.58□□□□□ -2
Col6a4A2AX52 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC2.58□□□□□ -2
Col6a4A2AX52 Gm45252-201ENSMUST00000211579 397 ntBASIC2.58□□□□□ -2
Col6a4A2AX52 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Col6a4A2AX52 Gm5176-202ENSMUST00000220267 583 ntBASIC2.58□□□□□ -2
Col6a4A2AX52 AC122924.1-201ENSMUST00000222044 163 ntBASIC2.58□□□□□ -2
Col6a4A2AX52 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC2.58□□□□□ -2
Col6a4A2AX52 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Col6a4A2AX52 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Col6a4A2AX52 Gm14333-201ENSMUST00000130484 264 ntBASIC2.57□□□□□ -2
Col6a4A2AX52 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC2.57□□□□□ -2
Col6a4A2AX52 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.57□□□□□ -2
Col6a4A2AX52 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC2.57□□□□□ -2
Col6a4A2AX52 Mir5127-201ENSMUST00000175295 71 ntBASIC2.57□□□□□ -2
Col6a4A2AX52 Gm44887-201ENSMUST00000208980 178 ntBASIC2.57□□□□□ -2
Col6a4A2AX52 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC2.57□□□□□ -2
Col6a4A2AX52 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
Col6a4A2AX52 Gm28240-201ENSMUST00000187560 2053 ntBASIC2.57□□□□□ -2
Col6a4A2AX52 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
Col6a4A2AX52 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Col6a4A2AX52 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Col6a4A2AX52 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Col6a4A2AX52 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Col6a4A2AX52 Gm9208-201ENSMUST00000120468 948 ntBASIC2.57□□□□□ -2
Col6a4A2AX52 Gm25153-201ENSMUST00000157118 156 ntBASIC2.57□□□□□ -2
Col6a4A2AX52 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC2.57□□□□□ -2
Col6a4A2AX52 Gm26988-201ENSMUST00000183296 945 ntBASIC2.57□□□□□ -2
Col6a4A2AX52 Gm43521-201ENSMUST00000197838 255 ntBASIC2.57□□□□□ -2
Col6a4A2AX52 Gm9023-201ENSMUST00000198408 1038 ntBASIC2.57□□□□□ -2
Col6a4A2AX52 Gm43107-201ENSMUST00000198729 255 ntBASIC2.57□□□□□ -2
Col6a4A2AX52 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.57□□□□□ -2
Col6a4A2AX52 AC162934.1-201ENSMUST00000222880 309 ntBASIC2.57□□□□□ -2
Col6a4A2AX52 Gm26449-201ENSMUST00000082452 104 ntBASIC2.57□□□□□ -2
Col6a4A2AX52 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col6a4A2AX52 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
Col6a4A2AX52 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.56□□□□□ -2
Col6a4A2AX52 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col6a4A2AX52 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col6a4A2AX52 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col6a4A2AX52 Mir344c-201ENSMUST00000103919 92 ntBASIC2.56□□□□□ -2
Col6a4A2AX52 Gm9427-201ENSMUST00000116187 651 ntBASIC2.56□□□□□ -2
Col6a4A2AX52 n-R5s32-201ENSMUST00000122495 103 ntBASIC2.56□□□□□ -2
Col6a4A2AX52 Gm3757-201ENSMUST00000125878 675 ntBASIC2.56□□□□□ -2
Col6a4A2AX52 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.56□□□□□ -2
Col6a4A2AX52 Gm17187-201ENSMUST00000164622 410 ntBASIC2.56□□□□□ -2
Col6a4A2AX52 Gm28614-201ENSMUST00000186483 458 ntBASIC2.56□□□□□ -2
Col6a4A2AX52 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.56□□□□□ -2
Col6a4A2AX52 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms