Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Gm16359-201ENSMUST00000124511 289 ntBASIC3.28□□□□□ -1.88
CtcflA2APF3 Gm6058-201ENSMUST00000154261 399 ntBASIC3.28□□□□□ -1.88
CtcflA2APF3 Gm22816-201ENSMUST00000157450 117 ntBASIC3.28□□□□□ -1.88
CtcflA2APF3 Gm22789-201ENSMUST00000157884 130 ntBASIC3.28□□□□□ -1.88
CtcflA2APF3 Gm26487-201ENSMUST00000158022 94 ntBASIC3.28□□□□□ -1.88
CtcflA2APF3 Gm23257-201ENSMUST00000158322 132 ntBASIC3.28□□□□□ -1.88
CtcflA2APF3 Gm25713-201ENSMUST00000158625 109 ntBASIC3.28□□□□□ -1.88
CtcflA2APF3 Gm7241-201ENSMUST00000159853 357 ntBASIC3.28□□□□□ -1.88
CtcflA2APF3 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CtcflA2APF3 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.28□□□□□ -1.88
CtcflA2APF3 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.28□□□□□ -1.88
CtcflA2APF3 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC3.28□□□□□ -1.88
CtcflA2APF3 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.28□□□□□ -1.88
CtcflA2APF3 Gm19418-201ENSMUST00000197436 580 ntBASIC3.28□□□□□ -1.88
CtcflA2APF3 Gm35876-201ENSMUST00000205044 459 ntBASIC3.28□□□□□ -1.88
CtcflA2APF3 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.28□□□□□ -1.88
CtcflA2APF3 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.28□□□□□ -1.88
CtcflA2APF3 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.28□□□□□ -1.88
CtcflA2APF3 Gm44585-201ENSMUST00000207150 607 ntBASIC3.28□□□□□ -1.88
CtcflA2APF3 Gm35857-201ENSMUST00000212739 178 ntBASIC3.28□□□□□ -1.88
CtcflA2APF3 AC161250.1-201ENSMUST00000213426 1111 ntBASIC3.28□□□□□ -1.88
CtcflA2APF3 Gm18225-201ENSMUST00000216708 742 ntBASIC3.28□□□□□ -1.88
CtcflA2APF3 AC153532.1-201ENSMUST00000218126 1111 ntBASIC3.28□□□□□ -1.88
CtcflA2APF3 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.28□□□□□ -1.88
CtcflA2APF3 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.28□□□□□ -1.88
CtcflA2APF3 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CtcflA2APF3 AC074315.1-201ENSMUST00000228801 214 ntBASIC3.28□□□□□ -1.88
CtcflA2APF3 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CtcflA2APF3 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CtcflA2APF3 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CtcflA2APF3 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CtcflA2APF3 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CtcflA2APF3 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.28□□□□□ -1.89
CtcflA2APF3 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm43216-201ENSMUST00000196295 1333 ntBASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm12392-201ENSMUST00000118014 938 ntBASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm13692-201ENSMUST00000120774 371 ntBASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm12578-201ENSMUST00000121244 417 ntBASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm14589-201ENSMUST00000121640 727 ntBASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm23228-201ENSMUST00000157296 270 ntBASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm24550-201ENSMUST00000158648 279 ntBASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm2862-201ENSMUST00000161524 328 ntBASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CtcflA2APF3 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.27□□□□□ -1.89
CtcflA2APF3 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.27□□□□□ -1.89
CtcflA2APF3 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.27□□□□□ -1.89
CtcflA2APF3 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm43559-201ENSMUST00000198755 466 ntBASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm2314-201ENSMUST00000200391 586 ntBASIC3.27□□□□□ -1.89
CtcflA2APF3 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm44650-201ENSMUST00000206929 194 ntBASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm18644-201ENSMUST00000211458 815 ntBASIC3.27□□□□□ -1.89
CtcflA2APF3 LOC667541-201ENSMUST00000223408 278 ntBASIC3.27□□□□□ -1.89
CtcflA2APF3 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.27□□□□□ -1.89
CtcflA2APF3 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.27□□□□□ -1.89
CtcflA2APF3 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm23443-201ENSMUST00000082916 128 ntBASIC3.27□□□□□ -1.89
CtcflA2APF3 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CtcflA2APF3 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.27□□□□□ -1.89
CtcflA2APF3 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.27□□□□□ -1.89
CtcflA2APF3 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.27□□□□□ -1.89
CtcflA2APF3 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CtcflA2APF3 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CtcflA2APF3 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.26□□□□□ -1.89
CtcflA2APF3 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CtcflA2APF3 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CtcflA2APF3 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.26□□□□□ -1.89
CtcflA2APF3 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CtcflA2APF3 Gm15161-201ENSMUST00000117340 387 ntBASIC3.26□□□□□ -1.89
CtcflA2APF3 Gm12858-201ENSMUST00000121913 208 ntBASIC3.26□□□□□ -1.89
CtcflA2APF3 Gm13852-201ENSMUST00000122350 242 ntBASIC3.26□□□□□ -1.89
CtcflA2APF3 Gm22204-201ENSMUST00000122654 327 ntBASIC3.26□□□□□ -1.89
CtcflA2APF3 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CtcflA2APF3 Gm24002-201ENSMUST00000158456 104 ntBASIC3.26□□□□□ -1.89
CtcflA2APF3 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CtcflA2APF3 Mir3104-201ENSMUST00000174911 63 ntBASIC3.26□□□□□ -1.89
CtcflA2APF3 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC3.26□□□□□ -1.89
CtcflA2APF3 Mir6345-201ENSMUST00000184286 128 ntBASIC3.26□□□□□ -1.89
CtcflA2APF3 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.26□□□□□ -1.89
CtcflA2APF3 Gm18505-201ENSMUST00000187360 790 ntBASIC3.26□□□□□ -1.89
CtcflA2APF3 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC3.26□□□□□ -1.89
CtcflA2APF3 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC3.26□□□□□ -1.89
CtcflA2APF3 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC3.26□□□□□ -1.89
CtcflA2APF3 Gm38201-201ENSMUST00000192143 387 ntBASIC3.26□□□□□ -1.89
CtcflA2APF3 Gm18547-201ENSMUST00000192439 811 ntBASIC3.26□□□□□ -1.89
CtcflA2APF3 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.26□□□□□ -1.89
CtcflA2APF3 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CtcflA2APF3 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC3.26□□□□□ -1.89
CtcflA2APF3 AC132104.1-201ENSMUST00000213615 260 ntBASIC3.26□□□□□ -1.89
CtcflA2APF3 Gm5649-201ENSMUST00000217918 951 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms