Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm37239-201ENSMUST00000193510 141 ntBASIC2.07□□□□□ -2.08
Trav4-3A0A0B4J1K1 Igkv9-128-201ENSMUST00000196602 353 ntBASIC2.07□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC2.07□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm3213-201ENSMUST00000219296 441 ntBASIC2.07□□□□□ -2.08
Trav4-3A0A0B4J1K1 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC2.07□□□□□ -2.08
Trav4-3A0A0B4J1K1 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC2.07□□□□□ -2.08
Trav4-3A0A0B4J1K1 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trav4-3A0A0B4J1K1 AC124729.1-201ENSMUST00000225327 976 ntBASIC2.07□□□□□ -2.08
Trav4-3A0A0B4J1K1 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trav4-3A0A0B4J1K1 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.07□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.07□□□□□ -2.08
Trav4-3A0A0B4J1K1 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trav4-3A0A0B4J1K1 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.07□□□□□ -2.08
Trav4-3A0A0B4J1K1 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
Trav4-3A0A0B4J1K1 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm14981-201ENSMUST00000117325 943 ntBASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm5757-201ENSMUST00000117494 528 ntBASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm11433-201ENSMUST00000118318 228 ntBASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm12988-201ENSMUST00000119054 478 ntBASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm12287-201ENSMUST00000119770 707 ntBASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm24736-201ENSMUST00000158862 130 ntBASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm6155-201ENSMUST00000173735 341 ntBASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm4479-201ENSMUST00000178807 171 ntBASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm8296-201ENSMUST00000185597 524 ntBASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm29597-201ENSMUST00000188035 308 ntBASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm44349-201ENSMUST00000197048 123 ntBASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm18429-201ENSMUST00000198707 421 ntBASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm43631-201ENSMUST00000202011 369 ntBASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 AL669916.5-201ENSMUST00000214874 361 ntBASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 AC141884.1-201ENSMUST00000226327 636 ntBASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 AC154838.1-201ENSMUST00000228944 911 ntBASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm44742-201ENSMUST00000207190 1412 ntBASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.06□□□□□ -2.08
Trav4-3A0A0B4J1K1 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm23481-201ENSMUST00000104173 131 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm22486-201ENSMUST00000116815 137 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm14578-201ENSMUST00000122166 391 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm25913-201ENSMUST00000157617 135 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm25860-201ENSMUST00000158252 126 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Scarna6-201ENSMUST00000158656 265 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm24876-201ENSMUST00000158780 92 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm25470-201ENSMUST00000175576 111 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm21893-201ENSMUST00000179119 397 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Mir6386-201ENSMUST00000183558 104 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm17916-202ENSMUST00000187634 1187 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm37417-201ENSMUST00000195257 454 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm43044-201ENSMUST00000198091 379 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 AC174780.1-201ENSMUST00000199415 1107 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm18791-201ENSMUST00000204611 726 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm44208-201ENSMUST00000205199 421 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 AL772397.1-201ENSMUST00000216707 606 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm4036-201ENSMUST00000220842 626 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 AC154515.2-201ENSMUST00000226093 406 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm23847-201ENSMUST00000083829 110 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 AC124586.1-201ENSMUST00000221673 2795 ntBASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
Trav4-3A0A0B4J1K1 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav4-3A0A0B4J1K1 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav4-3A0A0B4J1K1 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trav4-3A0A0B4J1K1 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms