Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 Gm27960-201ENSMUST00000183445 184 ntBASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 Ighv1-44-201ENSMUST00000195597 352 ntBASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 Mir6906-201ENSMUST00000198998 58 ntBASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 Gm6520-201ENSMUST00000200636 410 ntBASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 Gm42458-201ENSMUST00000201914 369 ntBASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 Gm18602-201ENSMUST00000209794 851 ntBASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 n-R5s215-201ENSMUST00000082480 104 ntBASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 Gm38299-201ENSMUST00000193214 3789 ntBASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Prpf40aQ9R1C7 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Gm37551-201ENSMUST00000195556 2861 ntBASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Gm43896-201ENSMUST00000203440 2032 ntBASIC6□□□□□ -1.45
Prpf40aQ9R1C7 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Gm26300-201ENSMUST00000102282 94 ntBASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Gm11388-201ENSMUST00000120908 159 ntBASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Gm23779-201ENSMUST00000157938 64 ntBASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Gm27148-201ENSMUST00000185086 160 ntBASIC6□□□□□ -1.45
Prpf40aQ9R1C7 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Gm44720-201ENSMUST00000206076 260 ntBASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 CT030182.3-201ENSMUST00000225986 582 ntBASIC6□□□□□ -1.45
Prpf40aQ9R1C7 AC164315.1-201ENSMUST00000226452 708 ntBASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Gm43527-201ENSMUST00000198749 3178 ntBASIC6□□□□□ -1.45
Prpf40aQ9R1C7 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Gm37456-201ENSMUST00000193176 5837 ntBASIC6□□□□□ -1.45
Prpf40aQ9R1C7 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Mir147-201ENSMUST00000102354 79 ntBASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Mir297a-2-201ENSMUST00000103795 90 ntBASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Gm11826-201ENSMUST00000118781 438 ntBASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Gm14520-201ENSMUST00000119258 387 ntBASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Gm6584-201ENSMUST00000119671 447 ntBASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Gm11849-201ENSMUST00000121293 261 ntBASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Gm12110-201ENSMUST00000121601 579 ntBASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Gm11200-201ENSMUST00000121698 448 ntBASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Gm25489-201ENSMUST00000158727 141 ntBASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Gm3170-201ENSMUST00000168753 850 ntBASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Mir5110-201ENSMUST00000175537 87 ntBASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Gm3348-201ENSMUST00000177813 850 ntBASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 LOC665443-201ENSMUST00000212284 796 ntBASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.99□□□□□ -1.45
Prpf40aQ9R1C7 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms