Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm34091-201ENSMUST00000200875 604 ntBASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm6056-201ENSMUST00000221253 488 ntBASIC5.63□□□□□ -1.51
Nubp1Q9R060 Mylf-ps-201ENSMUST00000222174 421 ntBASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.63□□□□□ -1.51
Nubp1Q9R060 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Nubp1Q9R060 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nubp1Q9R060 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC5.62□□□□□ -1.51
Nubp1Q9R060 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Nubp1Q9R060 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Nubp1Q9R060 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nubp1Q9R060 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Nubp1Q9R060 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Nubp1Q9R060 Mir700-201ENSMUST00000102169 79 ntBASIC5.62□□□□□ -1.51
Nubp1Q9R060 Gm24671-201ENSMUST00000104159 158 ntBASIC5.62□□□□□ -1.51
Nubp1Q9R060 Gm15332-201ENSMUST00000118386 357 ntBASIC5.62□□□□□ -1.51
Nubp1Q9R060 Gm15162-201ENSMUST00000119325 283 ntBASIC5.62□□□□□ -1.51
Nubp1Q9R060 Gm25637-201ENSMUST00000157529 107 ntBASIC5.62□□□□□ -1.51
Nubp1Q9R060 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Nubp1Q9R060 Mir5129-201ENSMUST00000174938 78 ntBASIC5.62□□□□□ -1.51
Nubp1Q9R060 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.62□□□□□ -1.51
Nubp1Q9R060 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.62□□□□□ -1.51
Nubp1Q9R060 Gm8419-201ENSMUST00000189886 412 ntBASIC5.62□□□□□ -1.51
Nubp1Q9R060 Gm9696-202ENSMUST00000191541 830 ntBASIC5.62□□□□□ -1.51
Nubp1Q9R060 Gm8009-201ENSMUST00000191672 436 ntBASIC5.62□□□□□ -1.51
Nubp1Q9R060 Gm37609-201ENSMUST00000191778 678 ntBASIC5.62□□□□□ -1.51
Nubp1Q9R060 Gm9332-201ENSMUST00000198431 730 ntBASIC5.62□□□□□ -1.51
Nubp1Q9R060 Gm7652-201ENSMUST00000200440 1151 ntBASIC5.62□□□□□ -1.51
Nubp1Q9R060 AC122327.2-201ENSMUST00000220883 120 ntBASIC5.62□□□□□ -1.51
Nubp1Q9R060 AC122327.3-201ENSMUST00000221852 120 ntBASIC5.62□□□□□ -1.51
Nubp1Q9R060 AC166341.1-201ENSMUST00000223360 105 ntBASIC5.62□□□□□ -1.51
Nubp1Q9R060 AC123860.1-201ENSMUST00000228033 481 ntBASIC5.62□□□□□ -1.51
Nubp1Q9R060 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Nubp1Q9R060 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nubp1Q9R060 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nubp1Q9R060 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC5.62□□□□□ -1.51
Nubp1Q9R060 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Nubp1Q9R060 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Nubp1Q9R060 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Nubp1Q9R060 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.62□□□□□ -1.51
Nubp1Q9R060 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nubp1Q9R060 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Nubp1Q9R060 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC5.62□□□□□ -1.51
Nubp1Q9R060 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nubp1Q9R060 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Nubp1Q9R060 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nubp1Q9R060 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nubp1Q9R060 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC5.61□□□□□ -1.51
Nubp1Q9R060 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Gm44438-201ENSMUST00000204388 3236 ntBASIC5.61□□□□□ -1.51
Nubp1Q9R060 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC5.61□□□□□ -1.51
Nubp1Q9R060 Gm11852-201ENSMUST00000120806 222 ntBASIC5.61□□□□□ -1.51
Nubp1Q9R060 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC5.61□□□□□ -1.51
Nubp1Q9R060 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Gm23343-201ENSMUST00000158964 143 ntBASIC5.61□□□□□ -1.51
Nubp1Q9R060 Gm3370-201ENSMUST00000171785 500 ntBASIC5.61□□□□□ -1.51
Nubp1Q9R060 Gm17020-201ENSMUST00000172274 274 ntBASIC5.61□□□□□ -1.51
Nubp1Q9R060 Gm20691-201ENSMUST00000176889 333 ntBASIC5.61□□□□□ -1.51
Nubp1Q9R060 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Mir6903-201ENSMUST00000183597 88 ntBASIC5.61□□□□□ -1.51
Nubp1Q9R060 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC5.61□□□□□ -1.51
Nubp1Q9R060 Gm29657-201ENSMUST00000189807 342 ntBASIC5.61□□□□□ -1.51
Nubp1Q9R060 Gm43583-201ENSMUST00000199235 303 ntBASIC5.61□□□□□ -1.51
Nubp1Q9R060 Gm43600-201ENSMUST00000202134 223 ntBASIC5.61□□□□□ -1.51
Nubp1Q9R060 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.61□□□□□ -1.51
Nubp1Q9R060 Gm45002-201ENSMUST00000208045 120 ntBASIC5.61□□□□□ -1.51
Nubp1Q9R060 Gm45273-201ENSMUST00000211559 281 ntBASIC5.61□□□□□ -1.51
Nubp1Q9R060 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.61□□□□□ -1.51
Nubp1Q9R060 AC159709.1-201ENSMUST00000220445 349 ntBASIC5.61□□□□□ -1.51
Nubp1Q9R060 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.61□□□□□ -1.51
Nubp1Q9R060 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nubp1Q9R060 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms