Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Gm15018-201ENSMUST00000117090 633 ntBASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Gm11797-201ENSMUST00000121336 754 ntBASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Gm12313-201ENSMUST00000121347 421 ntBASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Mir6907-201ENSMUST00000183764 71 ntBASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Mir6385-201ENSMUST00000184295 105 ntBASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Gm42832-201ENSMUST00000196361 745 ntBASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Upk3aQ9JKX8 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm14050-201ENSMUST00000117052 346 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm14975-201ENSMUST00000118741 664 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm13359-201ENSMUST00000119000 695 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm22034-201ENSMUST00000157283 134 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm25058-201ENSMUST00000157365 128 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm25860-201ENSMUST00000158252 126 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm23773-201ENSMUST00000158985 296 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm23775-201ENSMUST00000158991 249 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm23152-201ENSMUST00000175322 116 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm22111-201ENSMUST00000178010 79 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm23687-201ENSMUST00000178664 79 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm24566-201ENSMUST00000179286 79 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm23305-201ENSMUST00000179342 79 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm26389-201ENSMUST00000179819 79 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm22130-201ENSMUST00000179979 79 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm22393-201ENSMUST00000180153 79 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm25085-201ENSMUST00000180298 79 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm19637-201ENSMUST00000185933 579 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm6947-201ENSMUST00000186254 78 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm9541-201ENSMUST00000188409 502 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm42526-201ENSMUST00000198956 393 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm17987-201ENSMUST00000206902 603 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm7786-201ENSMUST00000210494 436 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm5358-201ENSMUST00000212814 353 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm18043-201ENSMUST00000216741 739 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm7034-201ENSMUST00000218638 645 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Snora31-201ENSMUST00000083213 130 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.44□□□□□ -1.86
Upk3aQ9JKX8 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Upk3aQ9JKX8 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Upk3aQ9JKX8 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Upk3aQ9JKX8 Gm23256-201ENSMUST00000102235 110 ntBASIC3.43□□□□□ -1.86
Upk3aQ9JKX8 Gm26140-201ENSMUST00000103807 110 ntBASIC3.43□□□□□ -1.86
Upk3aQ9JKX8 Gm26145-201ENSMUST00000104476 127 ntBASIC3.43□□□□□ -1.86
Upk3aQ9JKX8 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Upk3aQ9JKX8 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
Upk3aQ9JKX8 Gm11874-201ENSMUST00000117437 130 ntBASIC3.43□□□□□ -1.86
Upk3aQ9JKX8 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.43□□□□□ -1.86
Upk3aQ9JKX8 Anp32-ps-201ENSMUST00000118265 388 ntBASIC3.43□□□□□ -1.86
Upk3aQ9JKX8 Gm11913-201ENSMUST00000119094 336 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms