Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm8988-201ENSMUST00000155015 1240 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Gm22310-201ENSMUST00000157509 116 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Gm23540-201ENSMUST00000157543 164 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Gm25427-201ENSMUST00000157605 103 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Gm23775-201ENSMUST00000158991 249 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Samd15-201ENSMUST00000169669 1194 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Gm27315-201ENSMUST00000183977 154 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.34□□□□□ -1.87
Lima1Q9ERG0 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Gm6680-201ENSMUST00000192789 950 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Gm37617-201ENSMUST00000194309 159 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Gm8703-201ENSMUST00000203793 730 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Gm44092-201ENSMUST00000204470 258 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Gm4501-201ENSMUST00000207330 551 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Gm4558-201ENSMUST00000207886 521 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Gm35405-201ENSMUST00000218754 400 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 AC125539.1-202ENSMUST00000226449 670 ntBASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Lima1Q9ERG0 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.34□□□□□ -1.88
Lima1Q9ERG0 Gm18719-201ENSMUST00000196696 1413 ntBASIC3.34□□□□□ -1.88
Lima1Q9ERG0 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Lima1Q9ERG0 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Lima1Q9ERG0 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Gm11406-201ENSMUST00000117418 484 ntBASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Gm15783-201ENSMUST00000117521 633 ntBASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Gm22840-201ENSMUST00000158444 136 ntBASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Gm19791-201ENSMUST00000180398 859 ntBASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Mir7028-201ENSMUST00000185016 64 ntBASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Gm37828-201ENSMUST00000192496 432 ntBASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Gm34272-201ENSMUST00000208886 253 ntBASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Gm8748-201ENSMUST00000211125 587 ntBASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Gm8423-201ENSMUST00000211387 607 ntBASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Lima1Q9ERG0 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Gm22245-201ENSMUST00000082479 103 ntBASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Gm22971-201ENSMUST00000083305 97 ntBASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Lima1Q9ERG0 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.32□□□□□ -1.88
Lima1Q9ERG0 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Gm5762-201ENSMUST00000119204 258 ntBASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Gm5384-201ENSMUST00000120313 463 ntBASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Gm25105-201ENSMUST00000122477 130 ntBASIC3.32□□□□□ -1.88
Lima1Q9ERG0 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Gm23602-201ENSMUST00000157258 132 ntBASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Gm23116-201ENSMUST00000158481 67 ntBASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Gm23583-201ENSMUST00000158533 289 ntBASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Gm28148-201ENSMUST00000186924 697 ntBASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.32□□□□□ -1.88
Lima1Q9ERG0 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Gm2059-201ENSMUST00000212025 287 ntBASIC3.32□□□□□ -1.88
Lima1Q9ERG0 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Gm7119-201ENSMUST00000221345 695 ntBASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Olfr844-201ENSMUST00000054106 930 ntBASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Mir132-201ENSMUST00000083603 66 ntBASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Lima1Q9ERG0 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Lima1Q9ERG0 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms