Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm23816-201ENSMUST00000179617 132 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm5116-201ENSMUST00000187732 463 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm29627-201ENSMUST00000187984 463 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm43043-201ENSMUST00000196579 412 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm44818-201ENSMUST00000206608 358 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm45870-201ENSMUST00000211269 601 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 AC132384.9-201ENSMUST00000218085 277 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm17890-201ENSMUST00000221419 757 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Mir383-201ENSMUST00000083523 70 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 AC147615.2-201ENSMUST00000219876 2154 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 AC154462.1-201ENSMUST00000228897 2260 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Upf1Q9EPU0 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.63□□□□□ -1.51
Upf1Q9EPU0 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.62□□□□□ -1.51
Upf1Q9EPU0 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Gm15058-201ENSMUST00000117689 458 ntBASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Gm12095-201ENSMUST00000121962 816 ntBASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Gm20657-201ENSMUST00000177079 515 ntBASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Gm43652-201ENSMUST00000196219 675 ntBASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Gm43039-201ENSMUST00000202883 963 ntBASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Gm4045-201ENSMUST00000204076 310 ntBASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Gm5001-201ENSMUST00000204361 331 ntBASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Gm44816-201ENSMUST00000206666 477 ntBASIC5.62□□□□□ -1.51
Upf1Q9EPU0 AC116460.1-201ENSMUST00000219040 313 ntBASIC5.62□□□□□ -1.51
Upf1Q9EPU0 CT010506.2-201ENSMUST00000225618 183 ntBASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Gm7808-201ENSMUST00000082002 387 ntBASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Gm25008-201ENSMUST00000083809 81 ntBASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Upf1Q9EPU0 Gm44078-201ENSMUST00000204652 2646 ntBASIC5.61□□□□□ -1.51
Upf1Q9EPU0 Gm43605-201ENSMUST00000199663 3426 ntBASIC5.61□□□□□ -1.51
Upf1Q9EPU0 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Upf1Q9EPU0 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.61□□□□□ -1.51
Upf1Q9EPU0 Mir669i-201ENSMUST00000117007 127 ntBASIC5.61□□□□□ -1.51
Upf1Q9EPU0 Gm13804-201ENSMUST00000119552 172 ntBASIC5.61□□□□□ -1.51
Upf1Q9EPU0 Gm12739-201ENSMUST00000119769 382 ntBASIC5.61□□□□□ -1.51
Upf1Q9EPU0 Gm14240-201ENSMUST00000120353 546 ntBASIC5.61□□□□□ -1.51
Upf1Q9EPU0 Mir1898-201ENSMUST00000122643 83 ntBASIC5.61□□□□□ -1.51
Upf1Q9EPU0 Gm22716-201ENSMUST00000177596 107 ntBASIC5.61□□□□□ -1.51
Upf1Q9EPU0 Gm19774-201ENSMUST00000190667 114 ntBASIC5.61□□□□□ -1.51
Upf1Q9EPU0 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.61□□□□□ -1.51
Upf1Q9EPU0 Trbv12-3-201ENSMUST00000192675 372 ntBASIC5.61□□□□□ -1.51
Upf1Q9EPU0 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.61□□□□□ -1.51
Upf1Q9EPU0 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Upf1Q9EPU0 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC5.61□□□□□ -1.51
Upf1Q9EPU0 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Upf1Q9EPU0 AL669916.5-201ENSMUST00000214874 361 ntBASIC5.61□□□□□ -1.51
Upf1Q9EPU0 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC5.61□□□□□ -1.51
Upf1Q9EPU0 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Upf1Q9EPU0 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Upf1Q9EPU0 AC154677.1-201ENSMUST00000227636 2805 ntBASIC5.61□□□□□ -1.51
Upf1Q9EPU0 Gm5548-201ENSMUST00000055878 397 ntBASIC5.61□□□□□ -1.51
Upf1Q9EPU0 Gm9845-201ENSMUST00000056409 598 ntBASIC5.61□□□□□ -1.51
Upf1Q9EPU0 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Upf1Q9EPU0 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms