Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Mir92b-201ENSMUST00000102300 83 ntBASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm11822-201ENSMUST00000119177 415 ntBASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm4852-201ENSMUST00000121202 729 ntBASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm12422-201ENSMUST00000121431 302 ntBASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm14972-201ENSMUST00000121780 364 ntBASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm23534-201ENSMUST00000157539 97 ntBASIC5.68□□□□□ -1.5
Clp1Q99LI9 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm6872-201ENSMUST00000165001 700 ntBASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm23523-201ENSMUST00000180190 107 ntBASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm5734-201ENSMUST00000189787 913 ntBASIC5.68□□□□□ -1.5
Clp1Q99LI9 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm37445-201ENSMUST00000195318 242 ntBASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm7721-201ENSMUST00000200446 546 ntBASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm45614-201ENSMUST00000209994 721 ntBASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm45422-201ENSMUST00000211476 246 ntBASIC5.68□□□□□ -1.5
Clp1Q99LI9 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.68□□□□□ -1.5
Clp1Q99LI9 AC153943.1-201ENSMUST00000219312 256 ntBASIC5.68□□□□□ -1.5
Clp1Q99LI9 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm24764-201ENSMUST00000083686 199 ntBASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm6043-201ENSMUST00000099961 492 ntBASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm43896-201ENSMUST00000203440 2032 ntBASIC5.68□□□□□ -1.5
Clp1Q99LI9 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Clp1Q99LI9 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Clp1Q99LI9 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Clp1Q99LI9 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.68□□□□□ -1.5
Clp1Q99LI9 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Clp1Q99LI9 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Clp1Q99LI9 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.68□□□□□ -1.5
Clp1Q99LI9 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Clp1Q99LI9 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm25943-201ENSMUST00000103791 90 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Mir466b-7-201ENSMUST00000103804 88 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Mir466b-5-201ENSMUST00000103900 88 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm10936-201ENSMUST00000105264 252 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm14001-201ENSMUST00000118847 247 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm15112-201ENSMUST00000120152 860 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm12007-201ENSMUST00000120978 597 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm23993-201ENSMUST00000157478 144 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm16569-201ENSMUST00000160526 314 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Mir466b-4-201ENSMUST00000178801 90 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm25285-201ENSMUST00000178951 90 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Mir466b-6-201ENSMUST00000180061 90 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Mir466c-2-201ENSMUST00000180211 90 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm26701-201ENSMUST00000181571 234 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm21673-201ENSMUST00000186640 436 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm9443-201ENSMUST00000188406 816 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm21135-201ENSMUST00000189023 436 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm9687-201ENSMUST00000189312 602 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC5.67□□□□□ -1.5
Clp1Q99LI9 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 AC153506.2-201ENSMUST00000218051 257 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm46369-201ENSMUST00000221577 401 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Clp1Q99LI9 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm24763-201ENSMUST00000083688 190 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Olfr895-201ENSMUST00000093864 951 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Clp1Q99LI9 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.67□□□□□ -1.5
Clp1Q99LI9 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Clp1Q99LI9 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Clp1Q99LI9 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Clp1Q99LI9 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Clp1Q99LI9 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.66□□□□□ -1.5
Clp1Q99LI9 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Clp1Q99LI9 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Clp1Q99LI9 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Clp1Q99LI9 Gm3675-201ENSMUST00000175904 1653 ntBASIC5.66□□□□□ -1.5
Clp1Q99LI9 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms