Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm3665-201ENSMUST00000177214 2461 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Mir7047-201ENSMUST00000184595 64 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm8151-201ENSMUST00000184817 871 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm29610-201ENSMUST00000187749 453 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm29138-201ENSMUST00000191444 348 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm29389-201ENSMUST00000191562 352 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm38221-201ENSMUST00000195146 365 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm19335-201ENSMUST00000195836 2069 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 AC133189.1-201ENSMUST00000198820 140 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm43841-201ENSMUST00000199491 586 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm43604-201ENSMUST00000199799 705 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm44879-201ENSMUST00000207007 503 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm18462-201ENSMUST00000208112 417 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm46146-201ENSMUST00000217483 346 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 AC170810.3-201ENSMUST00000226177 374 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 AC166344.2-201ENSMUST00000226747 374 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm23516-201ENSMUST00000093728 107 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm16436-201ENSMUST00000121510 1607 ntBASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm14624-201ENSMUST00000117746 192 ntBASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm11673-201ENSMUST00000117846 331 ntBASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm24251-201ENSMUST00000157324 114 ntBASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm23905-201ENSMUST00000157568 109 ntBASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm24507-201ENSMUST00000157683 134 ntBASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm22733-201ENSMUST00000158094 91 ntBASIC5.09□□□□□ -1.59
Ushbp1Q8R370 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm5258-201ENSMUST00000165437 327 ntBASIC5.09□□□□□ -1.59
Ushbp1Q8R370 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Mir6401-201ENSMUST00000184499 109 ntBASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm7654-201ENSMUST00000186738 683 ntBASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm18225-201ENSMUST00000216708 742 ntBASIC5.09□□□□□ -1.59
Ushbp1Q8R370 CT025680.1-201ENSMUST00000217375 375 ntBASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm18442-201ENSMUST00000220925 639 ntBASIC5.09□□□□□ -1.59
Ushbp1Q8R370 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm7093-201ENSMUST00000223004 581 ntBASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm12582-201ENSMUST00000030555 697 ntBASIC5.09□□□□□ -1.59
Ushbp1Q8R370 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm23302-201ENSMUST00000082710 100 ntBASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm43605-201ENSMUST00000199663 3426 ntBASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.09□□□□□ -1.59
Ushbp1Q8R370 Gm16332-201ENSMUST00000134229 2967 ntBASIC5.09□□□□□ -1.6
Ushbp1Q8R370 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
Ushbp1Q8R370 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.09□□□□□ -1.6
Ushbp1Q8R370 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Ushbp1Q8R370 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
Ushbp1Q8R370 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.6
Ushbp1Q8R370 Gm38699-201ENSMUST00000221301 1740 ntBASIC5.09□□□□□ -1.6
Ushbp1Q8R370 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Ushbp1Q8R370 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Gm13614-201ENSMUST00000117306 503 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Gm13567-201ENSMUST00000118026 247 ntBASIC5.08□□□□□ -1.6
Ushbp1Q8R370 Gm13785-201ENSMUST00000119099 690 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms