Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Clrn1Q8K445 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.61□□□□□ -1.67
Clrn1Q8K445 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Clrn1Q8K445 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC4.61□□□□□ -1.67
Clrn1Q8K445 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Clrn1Q8K445 Gm37174-201ENSMUST00000194699 3058 ntBASIC4.61□□□□□ -1.67
Clrn1Q8K445 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.61□□□□□ -1.67
Clrn1Q8K445 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Clrn1Q8K445 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC4.61□□□□□ -1.67
Clrn1Q8K445 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Clrn1Q8K445 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm43924-201ENSMUST00000204851 1736 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Mir879-201ENSMUST00000104703 76 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm6923-201ENSMUST00000118343 406 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm6797-201ENSMUST00000119440 512 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm12854-201ENSMUST00000128518 297 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm14364-201ENSMUST00000129209 267 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm23327-201ENSMUST00000157420 78 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm8338-201ENSMUST00000163928 363 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm9320-201ENSMUST00000184151 473 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm27551-201ENSMUST00000184258 77 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm20056-201ENSMUST00000194813 519 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm43043-201ENSMUST00000196579 412 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm44142-201ENSMUST00000203358 311 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm44989-201ENSMUST00000204749 217 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC4.6□□□□□ -1.67
Clrn1Q8K445 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.6□□□□□ -1.67
Clrn1Q8K445 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Clrn1Q8K445 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 AC154627.3-201ENSMUST00000228441 334 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm7665-201ENSMUST00000076710 297 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm23404-201ENSMUST00000082543 97 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm23796-201ENSMUST00000084011 160 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Clrn1Q8K445 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Gm44535-201ENSMUST00000208889 3136 ntBASIC4.6□□□□□ -1.67
Clrn1Q8K445 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Clrn1Q8K445 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gm11372-201ENSMUST00000117348 570 ntBASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gm9078-201ENSMUST00000119126 617 ntBASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gm13475-201ENSMUST00000119290 234 ntBASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gm12808-201ENSMUST00000120597 404 ntBASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gm13132-201ENSMUST00000121194 472 ntBASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gm11200-201ENSMUST00000121698 448 ntBASIC4.59□□□□□ -1.67
Clrn1Q8K445 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gm24737-201ENSMUST00000158861 100 ntBASIC4.59□□□□□ -1.67
Clrn1Q8K445 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gm20657-201ENSMUST00000177079 515 ntBASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gm25314-201ENSMUST00000178810 79 ntBASIC4.59□□□□□ -1.67
Clrn1Q8K445 Mir7006-201ENSMUST00000183624 69 ntBASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.59□□□□□ -1.67
Clrn1Q8K445 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms