Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm26064-201ENSMUST00000083381 109 ntBASIC5.05□□□□□ -1.6
Vps53Q8CCB4 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm5248-201ENSMUST00000186108 4046 ntBASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm43201-201ENSMUST00000195925 3416 ntBASIC5.05□□□□□ -1.6
Vps53Q8CCB4 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
Vps53Q8CCB4 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Gm3665-201ENSMUST00000177214 2461 ntBASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Gm12358-201ENSMUST00000121842 520 ntBASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC5.04□□□□□ -1.6
Vps53Q8CCB4 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Gm22968-201ENSMUST00000157955 118 ntBASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Gm23032-201ENSMUST00000157995 107 ntBASIC5.04□□□□□ -1.6
Vps53Q8CCB4 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Gm28414-201ENSMUST00000190111 294 ntBASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Gm29097-201ENSMUST00000190273 422 ntBASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Gm43431-201ENSMUST00000198577 340 ntBASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Gm31230-201ENSMUST00000199725 785 ntBASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Gm4501-201ENSMUST00000207330 551 ntBASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Gm4558-201ENSMUST00000207886 521 ntBASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Gm45710-201ENSMUST00000212847 215 ntBASIC5.04□□□□□ -1.6
Vps53Q8CCB4 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Gm5374-201ENSMUST00000222868 657 ntBASIC5.04□□□□□ -1.6
Vps53Q8CCB4 CT010480.5-201ENSMUST00000225026 217 ntBASIC5.04□□□□□ -1.6
Vps53Q8CCB4 AC155167.1-201ENSMUST00000228931 614 ntBASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Mir202-201ENSMUST00000083568 72 ntBASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Gm43665-201ENSMUST00000198672 1659 ntBASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Hm629797-201ENSMUST00000183645 2398 ntBASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Vps53Q8CCB4 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Gm10997-201ENSMUST00000210294 1500 ntBASIC5.03□□□□□ -1.6
Vps53Q8CCB4 AC142245.1-201ENSMUST00000226611 1505 ntBASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Gm7646-201ENSMUST00000198590 1346 ntBASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Gm7834-201ENSMUST00000117560 437 ntBASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Gm11698-201ENSMUST00000117948 455 ntBASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Gm11943-201ENSMUST00000119473 327 ntBASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Gm4222-201ENSMUST00000165784 470 ntBASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Gm11394-201ENSMUST00000181421 517 ntBASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Gm5974-201ENSMUST00000181607 986 ntBASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Gm18667-201ENSMUST00000186523 484 ntBASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Gm28655-201ENSMUST00000191538 692 ntBASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Gm4734-201ENSMUST00000200117 777 ntBASIC5.03□□□□□ -1.6
Vps53Q8CCB4 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Gm44871-201ENSMUST00000207821 497 ntBASIC5.03□□□□□ -1.6
Vps53Q8CCB4 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.03□□□□□ -1.6
Vps53Q8CCB4 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Vps53Q8CCB4 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC5.02□□□□□ -1.61
Vps53Q8CCB4 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Vps53Q8CCB4 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Vps53Q8CCB4 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC5.02□□□□□ -1.61
Vps53Q8CCB4 Gm14975-201ENSMUST00000118741 664 ntBASIC5.02□□□□□ -1.61
Vps53Q8CCB4 Gm14534-201ENSMUST00000120045 357 ntBASIC5.02□□□□□ -1.61
Vps53Q8CCB4 Gm11420-201ENSMUST00000120047 402 ntBASIC5.02□□□□□ -1.61
Vps53Q8CCB4 Gm13009-201ENSMUST00000121307 267 ntBASIC5.02□□□□□ -1.61
Vps53Q8CCB4 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC5.02□□□□□ -1.61
Vps53Q8CCB4 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC5.02□□□□□ -1.61
Vps53Q8CCB4 Gm26271-201ENSMUST00000158349 104 ntBASIC5.02□□□□□ -1.61
Vps53Q8CCB4 Gm15974-201ENSMUST00000159103 531 ntBASIC5.02□□□□□ -1.61
Vps53Q8CCB4 Mir5106-201ENSMUST00000174936 73 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms