Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm9443-201ENSMUST00000188406 816 ntBASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm6543-201ENSMUST00000197353 808 ntBASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm43724-201ENSMUST00000197516 226 ntBASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm43444-201ENSMUST00000198123 291 ntBASIC6.1□□□□□ -1.43
Trim47Q8C0E3 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 AC122188.1-201ENSMUST00000217534 312 ntBASIC6.1□□□□□ -1.43
Trim47Q8C0E3 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 AC125484.1-201ENSMUST00000223218 234 ntBASIC6.1□□□□□ -1.43
Trim47Q8C0E3 AC117656.3-202ENSMUST00000225842 1055 ntBASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm25126-201ENSMUST00000083343 102 ntBASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm43437-201ENSMUST00000198535 3955 ntBASIC6.09□□□□□ -1.43
Trim47Q8C0E3 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Gm29084-201ENSMUST00000185587 1452 ntBASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Gm23750-201ENSMUST00000104222 132 ntBASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Gm14871-201ENSMUST00000119056 194 ntBASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Gm11582-201ENSMUST00000121041 236 ntBASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Gm25430-201ENSMUST00000157614 289 ntBASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Gm23806-201ENSMUST00000175157 109 ntBASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Gm27851-201ENSMUST00000183529 63 ntBASIC6.09□□□□□ -1.43
Trim47Q8C0E3 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Gm37029-201ENSMUST00000195773 239 ntBASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Gm43601-201ENSMUST00000196294 945 ntBASIC6.09□□□□□ -1.43
Trim47Q8C0E3 Gm9332-201ENSMUST00000198431 730 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms