Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Mir6960-201ENSMUST00000183449 61 ntBASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Gm42428-201ENSMUST00000198677 302 ntBASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Gm18482-201ENSMUST00000202405 760 ntBASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Gm19131-201ENSMUST00000203408 789 ntBASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Gm43976-201ENSMUST00000203637 235 ntBASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Gm44687-201ENSMUST00000204975 235 ntBASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Gm45232-201ENSMUST00000207811 162 ntBASIC5.79□□□□□ -1.48
Prpf40bQ80W14 AC152415.1-201ENSMUST00000213320 440 ntBASIC5.79□□□□□ -1.48
Prpf40bQ80W14 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.79□□□□□ -1.48
Prpf40bQ80W14 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.79□□□□□ -1.48
Prpf40bQ80W14 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf40bQ80W14 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Gm26056-201ENSMUST00000083043 104 ntBASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Prpf40bQ80W14 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Prpf40bQ80W14 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm24275-201ENSMUST00000116780 146 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm26156-201ENSMUST00000116999 123 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm15772-201ENSMUST00000118533 438 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm14129-201ENSMUST00000122436 291 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm23906-201ENSMUST00000157573 128 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm24737-201ENSMUST00000158861 100 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm27564-201ENSMUST00000185196 96 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC5.78□□□□□ -1.48
Prpf40bQ80W14 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm37878-201ENSMUST00000192108 387 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm44295-201ENSMUST00000203805 437 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm43924-201ENSMUST00000204851 1736 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm4501-201ENSMUST00000207330 551 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm4558-201ENSMUST00000207886 521 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm4528-201ENSMUST00000207905 551 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm45236-201ENSMUST00000208632 229 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm3816-201ENSMUST00000209803 433 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC5.78□□□□□ -1.48
Prpf40bQ80W14 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.78□□□□□ -1.48
Prpf40bQ80W14 AC147240.1-201ENSMUST00000218767 431 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 AC113031.5-201ENSMUST00000227116 606 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm22293-201ENSMUST00000083314 109 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Gm44078-201ENSMUST00000204652 2646 ntBASIC5.78□□□□□ -1.48
Prpf40bQ80W14 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.48
Prpf40bQ80W14 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm22468-201ENSMUST00000116680 120 ntBASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm26248-201ENSMUST00000116700 121 ntBASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm26137-201ENSMUST00000116701 121 ntBASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm26190-201ENSMUST00000116704 121 ntBASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm24617-201ENSMUST00000116705 121 ntBASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm25778-201ENSMUST00000116713 121 ntBASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm25774-201ENSMUST00000116717 121 ntBASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm22102-201ENSMUST00000116730 121 ntBASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm23177-201ENSMUST00000116784 121 ntBASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm24193-201ENSMUST00000116801 121 ntBASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm24744-201ENSMUST00000116833 121 ntBASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm24427-201ENSMUST00000116896 121 ntBASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm22346-201ENSMUST00000116918 121 ntBASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm23606-201ENSMUST00000116938 121 ntBASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm22029-201ENSMUST00000116940 121 ntBASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm26298-201ENSMUST00000116956 121 ntBASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm23844-201ENSMUST00000116959 121 ntBASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm24484-201ENSMUST00000117009 121 ntBASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm25347-201ENSMUST00000117026 121 ntBASIC5.77□□□□□ -1.49
Prpf40bQ80W14 Gm22112-201ENSMUST00000117032 121 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms