Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm13132-201ENSMUST00000121194 472 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 Gm11200-201ENSMUST00000121698 448 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 Gm24931-201ENSMUST00000158324 107 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 Gm3030-201ENSMUST00000163410 516 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 Gm22242-201ENSMUST00000175224 118 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 Gm20673-201ENSMUST00000177167 430 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 Gm22716-201ENSMUST00000177596 107 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 Gm25284-201ENSMUST00000180345 141 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 Gm27161-201ENSMUST00000183960 562 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 Gm42475-201ENSMUST00000201212 295 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC5.76□□□□□ -1.49
Trim56Q80VI1 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Trim56Q80VI1 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.76□□□□□ -1.49
Trim56Q80VI1 AC116589.7-201ENSMUST00000221061 239 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 AC164117.1-201ENSMUST00000221726 239 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 AC158525.1-201ENSMUST00000223806 576 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 AC126275.2-201ENSMUST00000225224 253 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Trim56Q80VI1 Gm22572-201ENSMUST00000082985 105 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 Gm4017-201ENSMUST00000084813 338 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim56Q80VI1 Gm37761-201ENSMUST00000194989 2098 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.76□□□□□ -1.49
Trim56Q80VI1 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim56Q80VI1 Gm38388-201ENSMUST00000195569 1430 ntBASIC5.75□□□□□ -1.49
Trim56Q80VI1 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim56Q80VI1 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Trim56Q80VI1 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Trim56Q80VI1 Gm22020-201ENSMUST00000104358 136 ntBASIC5.75□□□□□ -1.49
Trim56Q80VI1 Gm13672-201ENSMUST00000117554 459 ntBASIC5.75□□□□□ -1.49
Trim56Q80VI1 Gm12803-201ENSMUST00000118907 821 ntBASIC5.75□□□□□ -1.49
Trim56Q80VI1 Gm15231-201ENSMUST00000119174 447 ntBASIC5.75□□□□□ -1.49
Trim56Q80VI1 Gm6797-201ENSMUST00000119440 512 ntBASIC5.75□□□□□ -1.49
Trim56Q80VI1 Gm15142-201ENSMUST00000121013 856 ntBASIC5.75□□□□□ -1.49
Trim56Q80VI1 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim56Q80VI1 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim56Q80VI1 Gm22216-201ENSMUST00000157557 114 ntBASIC5.75□□□□□ -1.49
Trim56Q80VI1 Gm25655-201ENSMUST00000158465 290 ntBASIC5.75□□□□□ -1.49
Trim56Q80VI1 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim56Q80VI1 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim56Q80VI1 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim56Q80VI1 Gm18482-201ENSMUST00000202405 760 ntBASIC5.75□□□□□ -1.49
Trim56Q80VI1 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Trim56Q80VI1 Gm44794-201ENSMUST00000206550 411 ntBASIC5.75□□□□□ -1.49
Trim56Q80VI1 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.75□□□□□ -1.49
Trim56Q80VI1 Gm45710-201ENSMUST00000212847 215 ntBASIC5.75□□□□□ -1.49
Trim56Q80VI1 AC122905.2-201ENSMUST00000220325 269 ntBASIC5.75□□□□□ -1.49
Trim56Q80VI1 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim56Q80VI1 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim56Q80VI1 Gm23447-201ENSMUST00000082798 163 ntBASIC5.75□□□□□ -1.49
Trim56Q80VI1 Gm25126-201ENSMUST00000083343 102 ntBASIC5.75□□□□□ -1.49
Trim56Q80VI1 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Trim56Q80VI1 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim56Q80VI1 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim56Q80VI1 Gm37064-201ENSMUST00000193851 2231 ntBASIC5.75□□□□□ -1.49
Trim56Q80VI1 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim56Q80VI1 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim56Q80VI1 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Trim56Q80VI1 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm14706-201ENSMUST00000117744 255 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm16128-201ENSMUST00000117855 626 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm14681-201ENSMUST00000118047 411 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm14594-201ENSMUST00000118052 537 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm14590-201ENSMUST00000118934 537 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm11631-201ENSMUST00000119220 156 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm12820-201ENSMUST00000119233 342 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm26310-201ENSMUST00000157766 117 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm24192-201ENSMUST00000157978 145 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm25603-201ENSMUST00000158361 105 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm16566-201ENSMUST00000160387 910 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm25314-201ENSMUST00000178810 79 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm14596-201ENSMUST00000180268 537 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm14595-201ENSMUST00000180335 537 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm18828-202ENSMUST00000181035 310 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm17781-201ENSMUST00000195232 649 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm43652-201ENSMUST00000196219 675 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm44402-201ENSMUST00000203677 238 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm45402-201ENSMUST00000211796 223 ntBASIC5.74□□□□□ -1.49
Trim56Q80VI1 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Trim56Q80VI1 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms