Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trim28Q62318 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim28Q62318 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim28Q62318 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim28Q62318 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim28Q62318 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim28Q62318 Gm38104-201ENSMUST00000195121 1895 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim28Q62318 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim28Q62318 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Trim28Q62318 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Trim28Q62318 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Trim28Q62318 Gm22591-201ENSMUST00000104243 106 ntBASIC5.42□□□□□ -1.54
Trim28Q62318 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC5.42□□□□□ -1.54
Trim28Q62318 Gm11708-201ENSMUST00000119530 832 ntBASIC5.42□□□□□ -1.54
Trim28Q62318 Mup-ps21-201ENSMUST00000119998 448 ntBASIC5.42□□□□□ -1.54
Trim28Q62318 Gm12578-201ENSMUST00000121244 417 ntBASIC5.42□□□□□ -1.54
Trim28Q62318 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC5.42□□□□□ -1.54
Trim28Q62318 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC5.42□□□□□ -1.54
Trim28Q62318 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC5.42□□□□□ -1.54
Trim28Q62318 Mir1264-201ENSMUST00000175381 86 ntBASIC5.42□□□□□ -1.54
Trim28Q62318 Mir1251-201ENSMUST00000175486 84 ntBASIC5.42□□□□□ -1.54
Trim28Q62318 Gm21638-201ENSMUST00000179473 836 ntBASIC5.42□□□□□ -1.54
Trim28Q62318 Gm27942-201ENSMUST00000184669 101 ntBASIC5.42□□□□□ -1.54
Trim28Q62318 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Trim28Q62318 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Trim28Q62318 Gm28267-201ENSMUST00000191093 265 ntBASIC5.42□□□□□ -1.54
Trim28Q62318 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Trim28Q62318 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC5.42□□□□□ -1.54
Trim28Q62318 Gm44754-201ENSMUST00000208155 400 ntBASIC5.42□□□□□ -1.54
Trim28Q62318 Gm45427-201ENSMUST00000209572 1253 ntBASIC5.42□□□□□ -1.54
Trim28Q62318 Gm45689-201ENSMUST00000210522 133 ntBASIC5.42□□□□□ -1.54
Trim28Q62318 Gm18729-201ENSMUST00000217230 621 ntBASIC5.42□□□□□ -1.54
Trim28Q62318 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Trim28Q62318 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Trim28Q62318 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Trim28Q62318 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Trim28Q62318 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.42□□□□□ -1.54
Trim28Q62318 Gm43665-201ENSMUST00000198672 1659 ntBASIC5.42□□□□□ -1.54
Trim28Q62318 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Trim28Q62318 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
Trim28Q62318 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim28Q62318 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Trim28Q62318 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Trim28Q62318 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Trim28Q62318 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim28Q62318 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Trim28Q62318 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim28Q62318 Gm16436-201ENSMUST00000121510 1607 ntBASIC5.41□□□□□ -1.54
Trim28Q62318 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Trim28Q62318 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Trim28Q62318 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Trim28Q62318 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Trim28Q62318 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Trim28Q62318 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Trim28Q62318 Gm2348-201ENSMUST00000108782 300 ntBASIC5.41□□□□□ -1.54
Trim28Q62318 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC5.41□□□□□ -1.54
Trim28Q62318 Gm12268-201ENSMUST00000118398 442 ntBASIC5.41□□□□□ -1.54
Trim28Q62318 Gm11913-201ENSMUST00000119094 336 ntBASIC5.41□□□□□ -1.54
Trim28Q62318 Gm13711-201ENSMUST00000119708 453 ntBASIC5.41□□□□□ -1.54
Trim28Q62318 Gm5060-201ENSMUST00000120072 599 ntBASIC5.41□□□□□ -1.54
Trim28Q62318 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC5.41□□□□□ -1.54
Trim28Q62318 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC5.41□□□□□ -1.54
Trim28Q62318 Gm26148-201ENSMUST00000157430 68 ntBASIC5.41□□□□□ -1.54
Trim28Q62318 Gm22968-201ENSMUST00000157955 118 ntBASIC5.41□□□□□ -1.54
Trim28Q62318 Gm24850-201ENSMUST00000158029 119 ntBASIC5.41□□□□□ -1.54
Trim28Q62318 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Trim28Q62318 Gm17155-201ENSMUST00000165969 473 ntBASIC5.41□□□□□ -1.54
Trim28Q62318 Adgrg4-206ENSMUST00000168724 531 ntBASIC5.41□□□□□ -1.54
Trim28Q62318 Gm26335-201ENSMUST00000178449 107 ntBASIC5.41□□□□□ -1.54
Trim28Q62318 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Trim28Q62318 Gm29475-201ENSMUST00000190767 312 ntBASIC5.41□□□□□ -1.54
Trim28Q62318 Gm38075-201ENSMUST00000191979 920 ntBASIC5.41□□□□□ -1.54
Trim28Q62318 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC5.41□□□□□ -1.54
Trim28Q62318 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC5.41□□□□□ -1.54
Trim28Q62318 Gm19457-201ENSMUST00000200995 448 ntBASIC5.41□□□□□ -1.54
Trim28Q62318 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Trim28Q62318 Gm29848-201ENSMUST00000203107 295 ntBASIC5.41□□□□□ -1.54
Trim28Q62318 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Trim28Q62318 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Trim28Q62318 Gm7984-201ENSMUST00000060640 538 ntBASIC5.41□□□□□ -1.54
Trim28Q62318 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim28Q62318 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Trim28Q62318 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Trim28Q62318 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim28Q62318 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Trim28Q62318 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim28Q62318 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim28Q62318 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Trim28Q62318 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Trim28Q62318 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Trim28Q62318 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Trim28Q62318 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Trim28Q62318 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Trim28Q62318 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Trim28Q62318 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Trim28Q62318 Gm14197-201ENSMUST00000117480 1049 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 Gm15021-201ENSMUST00000117832 742 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 Gm15313-201ENSMUST00000119179 282 ntBASIC5.4□□□□□ -1.54
Trim28Q62318 Gm11719-201ENSMUST00000119399 351 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms