Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm18944-201ENSMUST00000207672 643 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm18644-201ENSMUST00000211458 815 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm46234-201ENSMUST00000218702 259 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 AC139376.1-201ENSMUST00000220056 1250 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 AC156952.1-201ENSMUST00000220361 793 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 AC115750.1-201ENSMUST00000220441 567 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 CT010511.1-201ENSMUST00000224570 315 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 AC096628.1-201ENSMUST00000226060 641 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 AC137961.1-201ENSMUST00000227924 734 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm22245-201ENSMUST00000082479 103 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm10356-201ENSMUST00000097152 1258 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Gm38073-201ENSMUST00000195141 3665 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Gm24831-201ENSMUST00000116778 126 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Gm13650-201ENSMUST00000117729 433 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Gm22478-201ENSMUST00000122570 154 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Gm17117-201ENSMUST00000163665 299 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 S100a11-ps-201ENSMUST00000181735 306 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Mir6996-201ENSMUST00000183922 61 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Gm29228-201ENSMUST00000185489 418 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Gm28148-201ENSMUST00000186924 697 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Gm23925-202ENSMUST00000188429 132 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Gm38216-201ENSMUST00000194872 1214 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Gm17887-201ENSMUST00000200194 547 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Gm17766-201ENSMUST00000209223 442 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Fth-ps3-201ENSMUST00000210405 358 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Gm45409-201ENSMUST00000211486 252 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Gm18850-201ENSMUST00000211578 388 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 AC122924.1-201ENSMUST00000222044 163 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 AC126275.1-201ENSMUST00000224881 446 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 AC131747.1-201ENSMUST00000226159 793 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Gm22005-201ENSMUST00000082795 141 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 n-R5s7-201ENSMUST00000083755 121 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Gm22350-201ENSMUST00000083924 156 ntBASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Trav3-3Q5R1C3 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC2.78□□□□□ -1.97
Trav3-3Q5R1C3 Gm19074-201ENSMUST00000218915 1429 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm21034-201ENSMUST00000207390 2608 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm21035-201ENSMUST00000207867 2608 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm24318-201ENSMUST00000104490 131 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm12954-201ENSMUST00000118610 611 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm25271-201ENSMUST00000157273 290 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Zakit-201ENSMUST00000157677 308 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm15796-201ENSMUST00000162135 204 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm13249-201ENSMUST00000177803 345 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm7909-201ENSMUST00000182688 614 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Mir7006-201ENSMUST00000183624 69 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm27568-201ENSMUST00000184220 99 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Mir6914-201ENSMUST00000184999 69 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm17937-201ENSMUST00000197908 742 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm35702-201ENSMUST00000198653 511 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Mir6994-201ENSMUST00000198985 73 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms