Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Gm8807-201ENSMUST00000179328 492 ntBASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Mir7014-201ENSMUST00000183853 63 ntBASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Gm32340-201ENSMUST00000192883 259 ntBASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Gm37085-201ENSMUST00000193780 196 ntBASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Gm44393-201ENSMUST00000197418 138 ntBASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Gm43841-201ENSMUST00000199491 586 ntBASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Gm44594-201ENSMUST00000208982 407 ntBASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 AC172027.1-201ENSMUST00000217659 337 ntBASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Gm38032-201ENSMUST00000195052 1589 ntBASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Trav8d-2Q5R1B6 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm13340-201ENSMUST00000117219 1545 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm9432-201ENSMUST00000117810 759 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm12722-201ENSMUST00000118507 493 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm15377-201ENSMUST00000119594 246 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm26000-201ENSMUST00000157991 107 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm24898-201ENSMUST00000158133 106 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm25898-201ENSMUST00000158303 106 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm18560-201ENSMUST00000173463 1123 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm24019-201ENSMUST00000178620 107 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm26243-201ENSMUST00000179260 107 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Mir6413-201ENSMUST00000184049 108 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm27427-201ENSMUST00000185134 193 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm29011-201ENSMUST00000191059 712 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm37219-201ENSMUST00000192036 926 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm37575-201ENSMUST00000195467 309 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm18611-201ENSMUST00000200334 1118 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm17987-201ENSMUST00000206902 603 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm34005-201ENSMUST00000215834 282 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 AC134864.1-201ENSMUST00000226326 511 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 AC106830.1-201ENSMUST00000228032 1003 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm23296-201ENSMUST00000082555 107 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm24859-201ENSMUST00000082729 107 ntBASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
Trav8d-2Q5R1B6 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trav8d-2Q5R1B6 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trav8d-2Q5R1B6 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trav8d-2Q5R1B6 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.44□□□□□ -1.86
Trav8d-2Q5R1B6 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trav8d-2Q5R1B6 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.44□□□□□ -1.86
Trav8d-2Q5R1B6 Gm44288-201ENSMUST00000205061 2795 ntBASIC3.44□□□□□ -1.86
Trav8d-2Q5R1B6 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.44□□□□□ -1.86
Trav8d-2Q5R1B6 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trav8d-2Q5R1B6 Gm23322-201ENSMUST00000104464 167 ntBASIC3.44□□□□□ -1.86
Trav8d-2Q5R1B6 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trav8d-2Q5R1B6 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trav8d-2Q5R1B6 Gm25539-201ENSMUST00000116886 122 ntBASIC3.44□□□□□ -1.86
Trav8d-2Q5R1B6 Gm11488-201ENSMUST00000117277 863 ntBASIC3.44□□□□□ -1.86
Trav8d-2Q5R1B6 Gm14981-201ENSMUST00000117325 943 ntBASIC3.44□□□□□ -1.86
Trav8d-2Q5R1B6 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.44□□□□□ -1.86
Trav8d-2Q5R1B6 Gm11746-201ENSMUST00000119843 821 ntBASIC3.44□□□□□ -1.86
Trav8d-2Q5R1B6 Gm13557-201ENSMUST00000120771 382 ntBASIC3.44□□□□□ -1.86
Trav8d-2Q5R1B6 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.44□□□□□ -1.86
Trav8d-2Q5R1B6 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms