Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm27964-201ENSMUST00000185195 62 ntBASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Gm38356-201ENSMUST00000194313 408 ntBASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Gm19987-201ENSMUST00000216339 499 ntBASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Gm7034-201ENSMUST00000218638 645 ntBASIC3.61□□□□□ -1.83
Trim40Q3UWA4 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.61□□□□□ -1.83
Trim40Q3UWA4 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC3.61□□□□□ -1.83
Trim40Q3UWA4 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trim40Q3UWA4 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.61□□□□□ -1.83
Trim40Q3UWA4 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Gm43178-201ENSMUST00000197257 1386 ntBASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm336-201ENSMUST00000186376 1480 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm23431-201ENSMUST00000104006 107 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm23319-201ENSMUST00000104467 131 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm15125-201ENSMUST00000116185 800 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm12885-201ENSMUST00000122246 328 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm14903-201ENSMUST00000122435 537 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Mir6411-201ENSMUST00000183556 108 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Mir7056-201ENSMUST00000183776 59 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Mir6537-201ENSMUST00000184150 110 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm28155-201ENSMUST00000191066 151 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm42451-201ENSMUST00000197410 244 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm42502-201ENSMUST00000198550 1089 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm18791-201ENSMUST00000204611 726 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm44583-201ENSMUST00000207478 281 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm46103-201ENSMUST00000217614 341 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm18892-201ENSMUST00000217628 881 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm8785-201ENSMUST00000220259 487 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm4052-201ENSMUST00000220890 451 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 AC154419.1-201ENSMUST00000227627 272 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Mir34b-201ENSMUST00000083558 84 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trim40Q3UWA4 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.6□□□□□ -1.83
Trim40Q3UWA4 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm11830-201ENSMUST00000120175 561 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm14591-201ENSMUST00000120407 518 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm12466-201ENSMUST00000121199 620 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.59□□□□□ -1.83
Trim40Q3UWA4 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm26349-201ENSMUST00000157530 130 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm26036-201ENSMUST00000158149 144 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm23824-201ENSMUST00000158741 276 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm3123-201ENSMUST00000163480 480 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Gm5974-201ENSMUST00000181607 986 ntBASIC3.59□□□□□ -1.83
Trim40Q3UWA4 Mir6996-201ENSMUST00000183922 61 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms