Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Mir599-201ENSMUST00000102378 88 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm11490-201ENSMUST00000118128 272 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm15332-201ENSMUST00000118386 357 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm14831-201ENSMUST00000120253 409 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm13998-201ENSMUST00000120952 335 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm12732-201ENSMUST00000121688 180 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm24435-201ENSMUST00000157886 110 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm23115-201ENSMUST00000158480 108 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm22650-201ENSMUST00000175138 105 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Mup-ps11-201ENSMUST00000178040 545 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm7958-201ENSMUST00000178255 468 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Mup-ps3-201ENSMUST00000178315 545 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm7950-201ENSMUST00000179633 468 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm44322-201ENSMUST00000196830 115 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm6520-201ENSMUST00000200636 410 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm44312-201ENSMUST00000203536 469 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm44162-201ENSMUST00000203543 544 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm18467-201ENSMUST00000208805 434 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm44811-201ENSMUST00000209120 228 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm45367-201ENSMUST00000210171 347 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm24454-201ENSMUST00000083349 132 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm25755-201ENSMUST00000083396 107 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm26164-201ENSMUST00000083793 104 ntBASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Shisa3Q3UPR0 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm29488-201ENSMUST00000191427 2402 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm44894-201ENSMUST00000205280 2174 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Mir592-201ENSMUST00000102113 96 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm23739-201ENSMUST00000102295 108 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Mir147-201ENSMUST00000102354 79 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm23578-201ENSMUST00000103943 104 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Mir875-201ENSMUST00000104698 78 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm14868-201ENSMUST00000117840 216 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm12118-201ENSMUST00000119766 532 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm7931-201ENSMUST00000121537 271 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm13531-201ENSMUST00000121893 543 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 n-R5s24-201ENSMUST00000122518 117 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm25341-201ENSMUST00000157461 268 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm22849-201ENSMUST00000157713 307 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm24858-201ENSMUST00000158058 323 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm24179-201ENSMUST00000158925 127 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm16164-201ENSMUST00000160078 468 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm5263-201ENSMUST00000163646 601 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm10087-201ENSMUST00000167650 330 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm37692-201ENSMUST00000192633 232 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm7166-201ENSMUST00000199715 303 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm5735-201ENSMUST00000207053 167 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm45207-201ENSMUST00000207469 145 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 AC156559.2-201ENSMUST00000224403 384 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 AC129202.3-201ENSMUST00000224413 733 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Gm23055-201ENSMUST00000082805 94 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Mir452-201ENSMUST00000093629 85 ntBASIC4.87□□□□□ -1.63
Shisa3Q3UPR0 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms