Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm43494-201ENSMUST00000197672 388 ntBASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Gm42621-201ENSMUST00000198114 275 ntBASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Gm43227-201ENSMUST00000202239 677 ntBASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Gm44016-201ENSMUST00000203463 164 ntBASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Gm18388-201ENSMUST00000222339 557 ntBASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Gm4987-201ENSMUST00000078326 408 ntBASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Gm23455-201ENSMUST00000083331 100 ntBASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Gm25005-201ENSMUST00000083812 156 ntBASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Gm43613-201ENSMUST00000199409 1613 ntBASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Gm15019-201ENSMUST00000120148 434 ntBASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Gm14881-201ENSMUST00000120366 372 ntBASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Gm24008-201ENSMUST00000157733 138 ntBASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Gm25519-201ENSMUST00000158392 127 ntBASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Gm4207-201ENSMUST00000173144 960 ntBASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Gm28847-201ENSMUST00000186778 700 ntBASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Gm43814-201ENSMUST00000197851 413 ntBASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Gm35876-201ENSMUST00000205044 459 ntBASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Gm44927-201ENSMUST00000207573 716 ntBASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Gm18193-201ENSMUST00000210017 772 ntBASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 AC132104.1-201ENSMUST00000213615 260 ntBASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 AC132833.3-201ENSMUST00000227472 866 ntBASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Gm23925-201ENSMUST00000082471 132 ntBASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Mir101b-201ENSMUST00000083622 97 ntBASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Upf3bQ3ULL6 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm25272-201ENSMUST00000104293 128 ntBASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm23532-201ENSMUST00000104569 112 ntBASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm14163-201ENSMUST00000117342 217 ntBASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm13692-201ENSMUST00000120774 371 ntBASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm12858-201ENSMUST00000121913 208 ntBASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm22345-201ENSMUST00000122644 107 ntBASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm24537-201ENSMUST00000157950 102 ntBASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm25835-201ENSMUST00000158917 144 ntBASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm28877-201ENSMUST00000191349 604 ntBASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm43405-201ENSMUST00000198642 337 ntBASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm39147-201ENSMUST00000211376 465 ntBASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm24147-201ENSMUST00000082763 144 ntBASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Gm37303-201ENSMUST00000194202 1559 ntBASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.63□□□□□ -1.83
Upf3bQ3ULL6 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Upf3bQ3ULL6 Gm24935-201ENSMUST00000103770 110 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms