Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Brf2Q3UAW9 Gm37345-201ENSMUST00000193062 3138 ntBASIC3.98□□□□□ -1.77
Brf2Q3UAW9 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Brf2Q3UAW9 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Brf2Q3UAW9 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.98□□□□□ -1.77
Brf2Q3UAW9 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.98□□□□□ -1.77
Brf2Q3UAW9 Gm37916-201ENSMUST00000192153 2435 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm24273-201ENSMUST00000102332 164 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm25213-201ENSMUST00000102388 113 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm11432-201ENSMUST00000117334 231 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm11372-201ENSMUST00000117348 570 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm12852-201ENSMUST00000119478 719 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm12340-201ENSMUST00000121617 462 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm14916-201ENSMUST00000121904 204 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm14651-201ENSMUST00000147192 442 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm8604-201ENSMUST00000183150 965 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm27899-201ENSMUST00000184715 64 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm27564-201ENSMUST00000185196 96 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC3.97□□□□□ -1.77
Brf2Q3UAW9 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm7142-201ENSMUST00000194232 586 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm43043-201ENSMUST00000196579 412 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm43730-201ENSMUST00000199863 372 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm46138-201ENSMUST00000215294 426 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 AC132881.2-201ENSMUST00000225474 709 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm24611-201ENSMUST00000083272 107 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm22350-201ENSMUST00000083924 156 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Brf2Q3UAW9 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.96□□□□□ -1.77
Brf2Q3UAW9 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm23226-201ENSMUST00000116927 103 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm15426-201ENSMUST00000117823 556 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm14007-201ENSMUST00000118288 210 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm12543-201ENSMUST00000120410 543 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm14605-201ENSMUST00000120599 268 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm12466-201ENSMUST00000121199 620 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm12226-201ENSMUST00000144172 876 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm23585-201ENSMUST00000157656 102 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm25665-201ENSMUST00000157695 110 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm13249-201ENSMUST00000177803 345 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm13144-201ENSMUST00000179385 345 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm20574-201ENSMUST00000182867 917 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm27659-201ENSMUST00000183472 98 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm37300-201ENSMUST00000193327 280 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm44061-201ENSMUST00000203962 1195 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm46194-201ENSMUST00000218136 320 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 CR974429.1-201ENSMUST00000220877 827 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm18026-201ENSMUST00000222789 727 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Gm23448-201ENSMUST00000083151 104 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Brf2Q3UAW9 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC3.96□□□□□ -1.78
Brf2Q3UAW9 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Brf2Q3UAW9 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Brf2Q3UAW9 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms