Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm22395-201ENSMUST00000177427 96 ntBASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm25942-201ENSMUST00000180080 110 ntBASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm27611-201ENSMUST00000184690 108 ntBASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm29524-201ENSMUST00000190819 699 ntBASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm18900-201ENSMUST00000193218 584 ntBASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm9655-201ENSMUST00000211321 1284 ntBASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 AC152979.4-201ENSMUST00000219893 379 ntBASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm8785-201ENSMUST00000220259 487 ntBASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm26121-201ENSMUST00000083364 162 ntBASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ptchd3Q0EEE2 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.71□□□□□ -1.81
Ptchd3Q0EEE2 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Ptchd3Q0EEE2 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm24096-201ENSMUST00000103905 110 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm26273-201ENSMUST00000104180 131 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm6429-201ENSMUST00000117144 475 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm14879-201ENSMUST00000117308 507 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm12568-201ENSMUST00000117362 624 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm13831-201ENSMUST00000118764 302 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm13511-201ENSMUST00000121167 363 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm22637-201ENSMUST00000158144 283 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm24080-201ENSMUST00000175178 232 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Mir5134-201ENSMUST00000175529 78 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm20773-201ENSMUST00000178940 681 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm14527-201ENSMUST00000179300 639 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm27033-201ENSMUST00000183226 544 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm18505-201ENSMUST00000187360 790 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm6140-201ENSMUST00000192494 966 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm37290-201ENSMUST00000195775 339 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm45063-201ENSMUST00000203726 472 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm7034-201ENSMUST00000218638 645 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm31931-201ENSMUST00000219666 222 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm25147-201ENSMUST00000083030 105 ntBASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ptchd3Q0EEE2 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Ptchd3Q0EEE2 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ptchd3Q0EEE2 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ptchd3Q0EEE2 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ptchd3Q0EEE2 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ptchd3Q0EEE2 Gm14939-201ENSMUST00000120347 680 ntBASIC3.7□□□□□ -1.82
Ptchd3Q0EEE2 Gm12358-201ENSMUST00000121842 520 ntBASIC3.7□□□□□ -1.82
Ptchd3Q0EEE2 Gm13471-201ENSMUST00000122057 433 ntBASIC3.7□□□□□ -1.82
Ptchd3Q0EEE2 Gm25109-201ENSMUST00000122474 114 ntBASIC3.7□□□□□ -1.82
Ptchd3Q0EEE2 Gm4725-201ENSMUST00000151048 587 ntBASIC3.7□□□□□ -1.82
Ptchd3Q0EEE2 Gm25981-201ENSMUST00000157921 295 ntBASIC3.7□□□□□ -1.82
Ptchd3Q0EEE2 Gm22211-201ENSMUST00000158097 156 ntBASIC3.7□□□□□ -1.82
Ptchd3Q0EEE2 Gm23198-201ENSMUST00000158811 91 ntBASIC3.7□□□□□ -1.82
Ptchd3Q0EEE2 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ptchd3Q0EEE2 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC3.7□□□□□ -1.82
Ptchd3Q0EEE2 Gm28304-201ENSMUST00000185977 312 ntBASIC3.7□□□□□ -1.82
Ptchd3Q0EEE2 Gm29013-201ENSMUST00000187431 237 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms