Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Mir599-201ENSMUST00000102378 88 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 Gm24989-201ENSMUST00000104461 88 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 Snord19-201ENSMUST00000104609 76 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 Gm11572-201ENSMUST00000119164 120 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 Gm14581-201ENSMUST00000121726 198 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.06□□□□□ -1.44
Col9a1Q05722 Gm23571-201ENSMUST00000180073 127 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC6.06□□□□□ -1.44
Col9a1Q05722 Gm36954-201ENSMUST00000195362 363 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC6.06□□□□□ -1.44
Col9a1Q05722 Gm6615-201ENSMUST00000199426 631 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 Gm44844-201ENSMUST00000207242 336 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 Gm45101-201ENSMUST00000208327 232 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 Gm6842-201ENSMUST00000211361 390 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 AC158955.1-201ENSMUST00000227140 385 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 Gm25987-201ENSMUST00000083234 107 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Col9a1Q05722 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col9a1Q05722 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col9a1Q05722 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col9a1Q05722 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
Col9a1Q05722 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Col9a1Q05722 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col9a1Q05722 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col9a1Q05722 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col9a1Q05722 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col9a1Q05722 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Col9a1Q05722 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col9a1Q05722 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col9a1Q05722 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col9a1Q05722 AC112972.2-201ENSMUST00000228702 2210 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col9a1Q05722 Gm43970-201ENSMUST00000204346 3605 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col9a1Q05722 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col9a1Q05722 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col9a1Q05722 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col9a1Q05722 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
Col9a1Q05722 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col9a1Q05722 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.05□□□□□ -1.44
Col9a1Q05722 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col9a1Q05722 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Col9a1Q05722 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col9a1Q05722 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col9a1Q05722 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col9a1Q05722 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col9a1Q05722 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col9a1Q05722 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col9a1Q05722 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col9a1Q05722 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col9a1Q05722 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm22493-201ENSMUST00000104494 132 ntBASIC6.05□□□□□ -1.44
Col9a1Q05722 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm5379-201ENSMUST00000120973 826 ntBASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm12466-201ENSMUST00000121199 620 ntBASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm24392-201ENSMUST00000158136 103 ntBASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm24667-201ENSMUST00000158938 103 ntBASIC6.05□□□□□ -1.44
Col9a1Q05722 Mir669k-201ENSMUST00000177742 127 ntBASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm23002-201ENSMUST00000179221 107 ntBASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm25673-201ENSMUST00000179957 127 ntBASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm28967-201ENSMUST00000187351 281 ntBASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm28872-201ENSMUST00000191518 158 ntBASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm9379-201ENSMUST00000196790 646 ntBASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm44470-201ENSMUST00000203913 142 ntBASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm45513-201ENSMUST00000210228 376 ntBASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm6796-201ENSMUST00000211919 243 ntBASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm18413-201ENSMUST00000221573 655 ntBASIC6.05□□□□□ -1.44
Col9a1Q05722 AC125539.2-202ENSMUST00000227983 587 ntBASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm23626-201ENSMUST00000082458 133 ntBASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm26055-201ENSMUST00000083038 107 ntBASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm37221-201ENSMUST00000194472 3007 ntBASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col9a1Q05722 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col9a1Q05722 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col9a1Q05722 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col9a1Q05722 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm38212-201ENSMUST00000194081 2756 ntBASIC6.05□□□□□ -1.44
Col9a1Q05722 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col9a1Q05722 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC6.05□□□□□ -1.44
Col9a1Q05722 Gm43398-201ENSMUST00000196584 2742 ntBASIC6.05□□□□□ -1.44
Col9a1Q05722 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.04□□□□□ -1.44
Col9a1Q05722 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Col9a1Q05722 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col9a1Q05722 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.04□□□□□ -1.44
Col9a1Q05722 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col9a1Q05722 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col9a1Q05722 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Col9a1Q05722 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col9a1Q05722 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC6.04□□□□□ -1.44
Col9a1Q05722 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms