Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm15263-201ENSMUST00000121556 642 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Gm24836-201ENSMUST00000122609 108 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sox9Q04887 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC5.06□□□□□ -1.6
Sox9Q04887 Gm24251-201ENSMUST00000157324 114 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Gm25555-201ENSMUST00000158078 111 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Gm24730-201ENSMUST00000158228 117 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Gm25434-201ENSMUST00000158278 167 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Gm23583-201ENSMUST00000158533 289 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Gm23028-201ENSMUST00000158773 265 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.06□□□□□ -1.6
Sox9Q04887 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC5.06□□□□□ -1.6
Sox9Q04887 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Gm29228-201ENSMUST00000185489 418 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Gm17916-202ENSMUST00000187634 1187 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Scgb2b6-201ENSMUST00000188132 330 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC5.06□□□□□ -1.6
Sox9Q04887 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC5.06□□□□□ -1.6
Sox9Q04887 Gm43144-201ENSMUST00000198256 485 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC5.06□□□□□ -1.6
Sox9Q04887 Igkv11-114-201ENSMUST00000200013 346 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Gm44134-202ENSMUST00000204777 545 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Gm17737-201ENSMUST00000210183 1147 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Gm8672-201ENSMUST00000221200 332 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sox9Q04887 Gm26439-201ENSMUST00000082592 106 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sox9Q04887 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Sox9Q04887 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sox9Q04887 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sox9Q04887 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sox9Q04887 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sox9Q04887 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sox9Q04887 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sox9Q04887 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Sox9Q04887 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sox9Q04887 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Sox9Q04887 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Sox9Q04887 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 Gm14107-201ENSMUST00000117774 330 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 Gm14731-201ENSMUST00000119216 376 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 Gm14867-201ENSMUST00000120156 866 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 Gm11254-201ENSMUST00000122368 653 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 Gm22804-201ENSMUST00000158052 101 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 Gm24949-201ENSMUST00000183609 215 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 Mir7093-201ENSMUST00000184195 101 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 Zfp-ps-201ENSMUST00000185025 478 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 Gm8392-201ENSMUST00000185647 835 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.05□□□□□ -1.6
Sox9Q04887 Gm42828-201ENSMUST00000199669 469 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC5.05□□□□□ -1.6
Sox9Q04887 Gm6112-201ENSMUST00000208037 629 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC5.05□□□□□ -1.6
Sox9Q04887 Gm18703-201ENSMUST00000215318 333 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 Olfr936-202ENSMUST00000216912 937 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC5.05□□□□□ -1.6
Sox9Q04887 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 AC192333.2-201ENSMUST00000224771 196 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 AC109172.1-201ENSMUST00000227503 187 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 AC117588.3-201ENSMUST00000228517 325 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Sox9Q04887 Gm24031-201ENSMUST00000083930 131 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Sox9Q04887 Gm18913-201ENSMUST00000204311 1789 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Sox9Q04887 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
Sox9Q04887 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Sox9Q04887 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sox9Q04887 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC5.05□□□□□ -1.6
Sox9Q04887 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Sox9Q04887 Gm19335-201ENSMUST00000195836 2069 ntBASIC5.04□□□□□ -1.6
Sox9Q04887 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.04□□□□□ -1.6
Sox9Q04887 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sox9Q04887 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sox9Q04887 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sox9Q04887 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sox9Q04887 Gm11251-201ENSMUST00000119593 2800 ntBASIC5.04□□□□□ -1.6
Sox9Q04887 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Sox9Q04887 Gm14292-201ENSMUST00000118761 456 ntBASIC5.04□□□□□ -1.6
Sox9Q04887 Gm12543-201ENSMUST00000120410 543 ntBASIC5.04□□□□□ -1.6
Sox9Q04887 Gm14366-201ENSMUST00000121970 730 ntBASIC5.04□□□□□ -1.6
Sox9Q04887 Gm15022-201ENSMUST00000122074 746 ntBASIC5.04□□□□□ -1.6
Sox9Q04887 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC5.04□□□□□ -1.6
Sox9Q04887 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sox9Q04887 Gm23115-201ENSMUST00000158480 108 ntBASIC5.04□□□□□ -1.6
Sox9Q04887 Gm17919-201ENSMUST00000173344 312 ntBASIC5.04□□□□□ -1.6
Sox9Q04887 Gm26219-201ENSMUST00000175216 71 ntBASIC5.04□□□□□ -1.6
Sox9Q04887 Gm25037-201ENSMUST00000175418 110 ntBASIC5.04□□□□□ -1.6
Sox9Q04887 Gm27688-201ENSMUST00000183634 91 ntBASIC5.04□□□□□ -1.6
Sox9Q04887 Mir6393-201ENSMUST00000183709 94 ntBASIC5.04□□□□□ -1.6
Sox9Q04887 Gm10193-201ENSMUST00000188288 231 ntBASIC5.04□□□□□ -1.6
Sox9Q04887 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms