Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm14304-201ENSMUST00000117272 446 ntBASIC5.63□□□□□ -1.51
Col6a1Q04857 Gm15364-201ENSMUST00000119618 585 ntBASIC5.63□□□□□ -1.51
Col6a1Q04857 Gm6591-201ENSMUST00000121063 434 ntBASIC5.63□□□□□ -1.51
Col6a1Q04857 Gm14972-201ENSMUST00000121780 364 ntBASIC5.63□□□□□ -1.51
Col6a1Q04857 Gm14821-201ENSMUST00000121975 435 ntBASIC5.63□□□□□ -1.51
Col6a1Q04857 Gm22960-201ENSMUST00000122517 104 ntBASIC5.63□□□□□ -1.51
Col6a1Q04857 Gm22084-201ENSMUST00000157585 105 ntBASIC5.63□□□□□ -1.51
Col6a1Q04857 Mir7222-201ENSMUST00000183740 75 ntBASIC5.63□□□□□ -1.51
Col6a1Q04857 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.63□□□□□ -1.51
Col6a1Q04857 Gm9317-201ENSMUST00000197055 862 ntBASIC5.63□□□□□ -1.51
Col6a1Q04857 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC5.63□□□□□ -1.51
Col6a1Q04857 Gm43039-201ENSMUST00000202883 963 ntBASIC5.63□□□□□ -1.51
Col6a1Q04857 Gm44074-201ENSMUST00000204562 337 ntBASIC5.63□□□□□ -1.51
Col6a1Q04857 Gm19252-201ENSMUST00000204705 305 ntBASIC5.63□□□□□ -1.51
Col6a1Q04857 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.63□□□□□ -1.51
Col6a1Q04857 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC5.63□□□□□ -1.51
Col6a1Q04857 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC5.63□□□□□ -1.51
Col6a1Q04857 Gm20734-201ENSMUST00000216939 193 ntBASIC5.63□□□□□ -1.51
Col6a1Q04857 AC166358.10-201ENSMUST00000220556 144 ntBASIC5.63□□□□□ -1.51
Col6a1Q04857 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.63□□□□□ -1.51
Col6a1Q04857 CT010506.2-201ENSMUST00000225618 183 ntBASIC5.63□□□□□ -1.51
Col6a1Q04857 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Col6a1Q04857 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a1Q04857 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a1Q04857 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Col6a1Q04857 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a1Q04857 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a1Q04857 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a1Q04857 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
Col6a1Q04857 AC164102.1-201ENSMUST00000220524 1553 ntBASIC5.63□□□□□ -1.51
Col6a1Q04857 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a1Q04857 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Col6a1Q04857 Gm42537-201ENSMUST00000198260 2574 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Col6a1Q04857 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col6a1Q04857 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Col6a1Q04857 Mir450-2-201ENSMUST00000102444 69 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 Mir297a-2-201ENSMUST00000103795 90 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 Gm25316-201ENSMUST00000116826 118 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 Gm6797-201ENSMUST00000119440 512 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 Gm12543-201ENSMUST00000120410 543 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 Gm14037-201ENSMUST00000120576 313 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 Gm24836-201ENSMUST00000122609 108 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC5.62□□□□□ -1.51
Col6a1Q04857 Gm25365-201ENSMUST00000158852 121 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 Gm17081-201ENSMUST00000167363 478 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 Gm22395-201ENSMUST00000177427 96 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC5.62□□□□□ -1.51
Col6a1Q04857 Gm37616-201ENSMUST00000193974 322 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 Gm43043-201ENSMUST00000196579 412 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 Gm42758-201ENSMUST00000202146 283 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 Gm8719-201ENSMUST00000203602 534 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 Gm45232-201ENSMUST00000207811 162 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 Gm35262-201ENSMUST00000215133 267 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 Gm7034-201ENSMUST00000218638 645 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Col6a1Q04857 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col6a1Q04857 Olfr895-201ENSMUST00000093864 951 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a1Q04857 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.62□□□□□ -1.51
Col6a1Q04857 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
Col6a1Q04857 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a1Q04857 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col6a1Q04857 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col6a1Q04857 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col6a1Q04857 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col6a1Q04857 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Col6a1Q04857 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a1Q04857 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a1Q04857 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col6a1Q04857 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.61□□□□□ -1.51
Col6a1Q04857 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a1Q04857 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Col6a1Q04857 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm12285-201ENSMUST00000117347 233 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm11822-201ENSMUST00000119177 415 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm15493-201ENSMUST00000119461 528 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Defb44-ps-201ENSMUST00000126871 219 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC5.61□□□□□ -1.51
Col6a1Q04857 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm25913-201ENSMUST00000157617 135 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm24289-201ENSMUST00000157629 135 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm6486-201ENSMUST00000166202 434 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm10087-201ENSMUST00000167650 330 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm26177-201ENSMUST00000178683 107 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col6a1Q04857 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm26988-201ENSMUST00000183296 945 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm27781-201ENSMUST00000185185 92 ntBASIC5.61□□□□□ -1.51
Col6a1Q04857 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms