Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Nkx3-1P97436 AC099612.2-201ENSMUST00000226824 721 ntBASIC2.97□□□□□ -1.93
Nkx3-1P97436 AC121542.1-201ENSMUST00000227245 721 ntBASIC2.97□□□□□ -1.93
Nkx3-1P97436 AC107453.2-201ENSMUST00000227714 655 ntBASIC2.97□□□□□ -1.93
Nkx3-1P97436 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Nkx3-1P97436 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Nkx3-1P97436 Snord35b-201ENSMUST00000082833 87 ntBASIC2.97□□□□□ -1.93
Nkx3-1P97436 Snora70-201ENSMUST00000083047 137 ntBASIC2.97□□□□□ -1.93
Nkx3-1P97436 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Nkx3-1P97436 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC2.97□□□□□ -1.93
Nkx3-1P97436 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC2.97□□□□□ -1.93
Nkx3-1P97436 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Nkx3-1P97436 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Nkx3-1P97436 Gm3956-201ENSMUST00000164882 2560 ntBASIC2.97□□□□□ -1.93
Nkx3-1P97436 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Nkx3-1P97436 Gm12010-201ENSMUST00000122400 2017 ntBASIC2.97□□□□□ -1.93
Nkx3-1P97436 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
Nkx3-1P97436 AC154634.4-201ENSMUST00000226077 2665 ntBASIC2.96□□□□□ -1.93
Nkx3-1P97436 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Nkx3-1P97436 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Nkx3-1P97436 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Nkx3-1P97436 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Nkx3-1P97436 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Nkx3-1P97436 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Nkx3-1P97436 Gm6797-201ENSMUST00000119440 512 ntBASIC2.96□□□□□ -1.94
Nkx3-1P97436 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Nkx3-1P97436 Gm11708-201ENSMUST00000119530 832 ntBASIC2.96□□□□□ -1.94
Nkx3-1P97436 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC2.96□□□□□ -1.94
Nkx3-1P97436 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC2.96□□□□□ -1.94
Nkx3-1P97436 Gm14101-201ENSMUST00000121502 473 ntBASIC2.96□□□□□ -1.94
Nkx3-1P97436 Gm22956-201ENSMUST00000122520 80 ntBASIC2.96□□□□□ -1.94
Nkx3-1P97436 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Nkx3-1P97436 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Nkx3-1P97436 Gm23958-201ENSMUST00000157207 105 ntBASIC2.96□□□□□ -1.94
Nkx3-1P97436 Gm24537-201ENSMUST00000157950 102 ntBASIC2.96□□□□□ -1.94
Nkx3-1P97436 Gm24811-201ENSMUST00000175313 100 ntBASIC2.96□□□□□ -1.94
Nkx3-1P97436 Gm27374-201ENSMUST00000183660 81 ntBASIC2.96□□□□□ -1.94
Nkx3-1P97436 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Nkx3-1P97436 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC2.96□□□□□ -1.94
Nkx3-1P97436 Gm9931-201ENSMUST00000193584 1185 ntBASIC2.96□□□□□ -1.94
Nkx3-1P97436 Gm19057-201ENSMUST00000194329 1197 ntBASIC2.96□□□□□ -1.94
Nkx3-1P97436 Gm39147-201ENSMUST00000211376 465 ntBASIC2.96□□□□□ -1.94
Nkx3-1P97436 Gm8681-201ENSMUST00000219115 618 ntBASIC2.96□□□□□ -1.94
Nkx3-1P97436 Gm8785-201ENSMUST00000220259 487 ntBASIC2.96□□□□□ -1.94
Nkx3-1P97436 Gm18921-201ENSMUST00000221798 366 ntBASIC2.96□□□□□ -1.94
Nkx3-1P97436 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Nkx3-1P97436 AC124400.1-201ENSMUST00000225779 193 ntBASIC2.96□□□□□ -1.94
Nkx3-1P97436 AC137871.2-201ENSMUST00000226482 289 ntBASIC2.96□□□□□ -1.94
Nkx3-1P97436 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC2.96□□□□□ -1.94
Nkx3-1P97436 BC023105-201ENSMUST00000073997 1227 ntBASIC2.96□□□□□ -1.94
Nkx3-1P97436 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Nkx3-1P97436 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Nkx3-1P97436 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Nkx3-1P97436 Gm6300-201ENSMUST00000192393 1498 ntBASIC2.96□□□□□ -1.94
Nkx3-1P97436 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Nkx3-1P97436 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Nkx3-1P97436 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Nkx3-1P97436 Gm42614-201ENSMUST00000198724 1554 ntBASIC2.95□□□□□ -1.94
Nkx3-1P97436 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
Nkx3-1P97436 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Nkx3-1P97436 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Nkx3-1P97436 Gm37204-201ENSMUST00000192389 3961 ntBASIC2.95□□□□□ -1.94
Nkx3-1P97436 Gm38260-201ENSMUST00000193573 3995 ntBASIC2.95□□□□□ -1.94
Nkx3-1P97436 Gm25376-201ENSMUST00000104340 133 ntBASIC2.95□□□□□ -1.94
Nkx3-1P97436 Gm13803-201ENSMUST00000117547 489 ntBASIC2.95□□□□□ -1.94
Nkx3-1P97436 Gm7485-201ENSMUST00000119502 1109 ntBASIC2.95□□□□□ -1.94
Nkx3-1P97436 Gm26100-201ENSMUST00000157245 127 ntBASIC2.95□□□□□ -1.94
Nkx3-1P97436 Gm16353-201ENSMUST00000159458 1223 ntBASIC2.95□□□□□ -1.94
Nkx3-1P97436 Gm16563-201ENSMUST00000162673 423 ntBASIC2.95□□□□□ -1.94
Nkx3-1P97436 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Nkx3-1P97436 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Nkx3-1P97436 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC2.95□□□□□ -1.94
Nkx3-1P97436 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC2.95□□□□□ -1.94
Nkx3-1P97436 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC2.95□□□□□ -1.94
Nkx3-1P97436 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC2.95□□□□□ -1.94
Nkx3-1P97436 Gm43440-201ENSMUST00000201957 729 ntBASIC2.95□□□□□ -1.94
Nkx3-1P97436 Gm43932-201ENSMUST00000204499 52 ntBASIC2.95□□□□□ -1.94
Nkx3-1P97436 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC2.95□□□□□ -1.94
Nkx3-1P97436 Gm45860-201ENSMUST00000212700 334 ntBASIC2.95□□□□□ -1.94
Nkx3-1P97436 Gm30674-201ENSMUST00000214523 392 ntBASIC2.95□□□□□ -1.94
Nkx3-1P97436 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC2.95□□□□□ -1.94
Nkx3-1P97436 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Nkx3-1P97436 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Nkx3-1P97436 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Nkx3-1P97436 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Nkx3-1P97436 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Nkx3-1P97436 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Nkx3-1P97436 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Nkx3-1P97436 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Nkx3-1P97436 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Nkx3-1P97436 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Nkx3-1P97436 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC2.94□□□□□ -1.94
Nkx3-1P97436 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
Nkx3-1P97436 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
Nkx3-1P97436 Gm37983-201ENSMUST00000193207 2006 ntBASIC2.94□□□□□ -1.94
Nkx3-1P97436 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Nkx3-1P97436 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Nkx3-1P97436 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Nkx3-1P97436 Gm13122-201ENSMUST00000118380 453 ntBASIC2.94□□□□□ -1.94
Nkx3-1P97436 Gm14788-201ENSMUST00000119457 375 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms