Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.41□□□□□ -1.54
Sox1P53783 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.41□□□□□ -1.54
Sox1P53783 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sox1P53783 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sox1P53783 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.41□□□□□ -1.54
Sox1P53783 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sox1P53783 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.41□□□□□ -1.54
Sox1P53783 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.41□□□□□ -1.54
Sox1P53783 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sox1P53783 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Sox1P53783 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Sox1P53783 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Sox1P53783 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox1P53783 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Sox1P53783 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Sox1P53783 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.4□□□□□ -1.54
Sox1P53783 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Sox1P53783 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.4□□□□□ -1.54
Sox1P53783 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.4□□□□□ -1.54
Sox1P53783 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
Sox1P53783 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Sox1P53783 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Sox1P53783 Gm25420-201ENSMUST00000104216 127 ntBASIC5.4□□□□□ -1.54
Sox1P53783 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Sox1P53783 Gm13064-201ENSMUST00000119125 557 ntBASIC5.4□□□□□ -1.54
Sox1P53783 Gm14591-201ENSMUST00000120407 518 ntBASIC5.4□□□□□ -1.54
Sox1P53783 Gm11584-201ENSMUST00000120636 325 ntBASIC5.4□□□□□ -1.54
Sox1P53783 Gm17014-201ENSMUST00000120765 168 ntBASIC5.4□□□□□ -1.54
Sox1P53783 Gm11931-201ENSMUST00000121630 447 ntBASIC5.4□□□□□ -1.54
Sox1P53783 Gm15840-201ENSMUST00000122099 943 ntBASIC5.4□□□□□ -1.54
Sox1P53783 Gm22842-201ENSMUST00000157709 118 ntBASIC5.4□□□□□ -1.54
Sox1P53783 Gm26430-201ENSMUST00000178054 107 ntBASIC5.4□□□□□ -1.54
Sox1P53783 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC5.4□□□□□ -1.54
Sox1P53783 Gm38185-201ENSMUST00000193195 694 ntBASIC5.4□□□□□ -1.54
Sox1P53783 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.4□□□□□ -1.54
Sox1P53783 Gm43214-201ENSMUST00000199242 352 ntBASIC5.4□□□□□ -1.54
Sox1P53783 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.4□□□□□ -1.54
Sox1P53783 Gm44871-201ENSMUST00000207821 497 ntBASIC5.4□□□□□ -1.54
Sox1P53783 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.4□□□□□ -1.54
Sox1P53783 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Sox1P53783 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Sox1P53783 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Sox1P53783 Gm37668-201ENSMUST00000193745 1944 ntBASIC5.4□□□□□ -1.55
Sox1P53783 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Sox1P53783 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Sox1P53783 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Sox1P53783 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Sox1P53783 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.39□□□□□ -1.55
Sox1P53783 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Sox1P53783 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
Sox1P53783 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sox1P53783 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Sox1P53783 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Sox1P53783 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sox1P53783 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sox1P53783 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sox1P53783 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sox1P53783 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sox1P53783 Gm22266-201ENSMUST00000104011 138 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm24982-201ENSMUST00000104456 132 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm22468-201ENSMUST00000116680 120 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm26248-201ENSMUST00000116700 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm26137-201ENSMUST00000116701 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm26190-201ENSMUST00000116704 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm24617-201ENSMUST00000116705 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm25778-201ENSMUST00000116713 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm25774-201ENSMUST00000116717 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm22102-201ENSMUST00000116730 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm23177-201ENSMUST00000116784 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm24193-201ENSMUST00000116801 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm24744-201ENSMUST00000116833 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm24427-201ENSMUST00000116896 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm22346-201ENSMUST00000116918 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm23606-201ENSMUST00000116938 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm22029-201ENSMUST00000116940 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm26298-201ENSMUST00000116956 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm23844-201ENSMUST00000116959 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm24484-201ENSMUST00000117009 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm25347-201ENSMUST00000117026 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm22112-201ENSMUST00000117032 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm11874-201ENSMUST00000117437 130 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm11781-201ENSMUST00000118328 472 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm7312-201ENSMUST00000118798 469 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm15206-201ENSMUST00000119143 454 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm11830-201ENSMUST00000120175 561 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm15799-201ENSMUST00000120899 289 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm12422-201ENSMUST00000121431 302 ntBASIC5.39□□□□□ -1.55
Sox1P53783 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sox1P53783 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.39□□□□□ -1.55
Sox1P53783 Gm23167-201ENSMUST00000157155 103 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm22792-201ENSMUST00000157225 133 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Mir3112-201ENSMUST00000175431 82 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm22991-201ENSMUST00000178126 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm25754-201ENSMUST00000178653 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm22419-201ENSMUST00000178780 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm24802-201ENSMUST00000178897 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm25208-201ENSMUST00000178964 121 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 132.8 ms