Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Col1a1P11087 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col1a1P11087 Gm5552-201ENSMUST00000197149 515 ntBASIC3.69□□□□□ -1.82
Col1a1P11087 AC153932.1-201ENSMUST00000218558 787 ntBASIC3.69□□□□□ -1.82
Col1a1P11087 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col1a1P11087 Snord7-201ENSMUST00000083781 97 ntBASIC3.69□□□□□ -1.82
Col1a1P11087 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col1a1P11087 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.69□□□□□ -1.82
Col1a1P11087 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.69□□□□□ -1.82
Col1a1P11087 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Col1a1P11087 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Col1a1P11087 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
Col1a1P11087 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.69□□□□□ -1.82
Col1a1P11087 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.69□□□□□ -1.82
Col1a1P11087 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Col1a1P11087 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.69□□□□□ -1.82
Col1a1P11087 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col1a1P11087 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.69□□□□□ -1.82
Col1a1P11087 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Col1a1P11087 Gm14518-201ENSMUST00000117351 542 ntBASIC3.68□□□□□ -1.82
Col1a1P11087 Gm22849-201ENSMUST00000157713 307 ntBASIC3.68□□□□□ -1.82
Col1a1P11087 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Col1a1P11087 Gm18560-201ENSMUST00000173463 1123 ntBASIC3.68□□□□□ -1.82
Col1a1P11087 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.68□□□□□ -1.82
Col1a1P11087 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Col1a1P11087 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.68□□□□□ -1.82
Col1a1P11087 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Col1a1P11087 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Col1a1P11087 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Col1a1P11087 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.68□□□□□ -1.82
Col1a1P11087 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Col1a1P11087 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Col1a1P11087 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.67□□□□□ -1.82
Col1a1P11087 Gm29161-201ENSMUST00000188250 699 ntBASIC3.67□□□□□ -1.82
Col1a1P11087 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Col1a1P11087 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.67□□□□□ -1.82
Col1a1P11087 AC173482.3-201ENSMUST00000225492 1212 ntBASIC3.67□□□□□ -1.82
Col1a1P11087 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Col1a1P11087 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Col1a1P11087 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
Col1a1P11087 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.67□□□□□ -1.82
Col1a1P11087 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Col1a1P11087 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Col1a1P11087 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.67□□□□□ -1.82
Col1a1P11087 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.67□□□□□ -1.82
Col1a1P11087 Gm44675-201ENSMUST00000208188 2927 ntBASIC3.67□□□□□ -1.82
Col1a1P11087 Gm12858-201ENSMUST00000121913 208 ntBASIC3.67□□□□□ -1.82
Col1a1P11087 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.67□□□□□ -1.82
Col1a1P11087 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Col1a1P11087 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC3.67□□□□□ -1.82
Col1a1P11087 Gm22141-201ENSMUST00000157403 277 ntBASIC3.67□□□□□ -1.82
Col1a1P11087 Gm26028-201ENSMUST00000158660 294 ntBASIC3.67□□□□□ -1.82
Col1a1P11087 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3.67□□□□□ -1.82
Col1a1P11087 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.67□□□□□ -1.82
Col1a1P11087 Mir6401-201ENSMUST00000184499 109 ntBASIC3.67□□□□□ -1.82
Col1a1P11087 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.67□□□□□ -1.82
Col1a1P11087 Gm18433-202ENSMUST00000195682 196 ntBASIC3.67□□□□□ -1.82
Col1a1P11087 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.67□□□□□ -1.82
Col1a1P11087 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Col1a1P11087 Gm22864-201ENSMUST00000083950 130 ntBASIC3.67□□□□□ -1.82
Col1a1P11087 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Col1a1P11087 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Col1a1P11087 Gm37789-201ENSMUST00000192862 2889 ntBASIC3.66□□□□□ -1.82
Col1a1P11087 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col1a1P11087 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col1a1P11087 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col1a1P11087 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Col1a1P11087 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col1a1P11087 Gm38240-201ENSMUST00000195110 2487 ntBASIC3.66□□□□□ -1.82
Col1a1P11087 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col1a1P11087 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.66□□□□□ -1.82
Col1a1P11087 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.66□□□□□ -1.82
Col1a1P11087 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.66□□□□□ -1.82
Col1a1P11087 Gm28877-201ENSMUST00000191349 604 ntBASIC3.66□□□□□ -1.82
Col1a1P11087 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.66□□□□□ -1.82
Col1a1P11087 Gm26379-202ENSMUST00000200225 132 ntBASIC3.66□□□□□ -1.82
Col1a1P11087 Gm44256-201ENSMUST00000203304 335 ntBASIC3.66□□□□□ -1.82
Col1a1P11087 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.66□□□□□ -1.82
Col1a1P11087 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.66□□□□□ -1.82
Col1a1P11087 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.66□□□□□ -1.82
Col1a1P11087 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col1a1P11087 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col1a1P11087 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
Col1a1P11087 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.65□□□□□ -1.82
Col1a1P11087 Gm2033-201ENSMUST00000210753 2287 ntBASIC3.65□□□□□ -1.82
Col1a1P11087 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.65□□□□□ -1.83
Col1a1P11087 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col1a1P11087 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.65□□□□□ -1.83
Col1a1P11087 Gm13581-201ENSMUST00000120675 278 ntBASIC3.65□□□□□ -1.83
Col1a1P11087 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC3.65□□□□□ -1.83
Col1a1P11087 Gm18486-201ENSMUST00000184040 298 ntBASIC3.65□□□□□ -1.83
Col1a1P11087 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.65□□□□□ -1.83
Col1a1P11087 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC3.65□□□□□ -1.83
Col1a1P11087 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Col1a1P11087 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Col1a1P11087 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col1a1P11087 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Col1a1P11087 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Col1a1P11087 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Col1a1P11087 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms