Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm15443-201ENSMUST00000118947 820 ntBASIC4.36□□□□□ -1.71
Col3a1P08121 Gm16471-201ENSMUST00000121940 618 ntBASIC4.36□□□□□ -1.71
Col3a1P08121 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC4.36□□□□□ -1.71
Col3a1P08121 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Col3a1P08121 Gm22339-201ENSMUST00000157718 62 ntBASIC4.36□□□□□ -1.71
Col3a1P08121 Gm23317-201ENSMUST00000157999 129 ntBASIC4.36□□□□□ -1.71
Col3a1P08121 Gm23257-201ENSMUST00000158322 132 ntBASIC4.36□□□□□ -1.71
Col3a1P08121 Gm15946-201ENSMUST00000160654 423 ntBASIC4.36□□□□□ -1.71
Col3a1P08121 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Col3a1P08121 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC4.36□□□□□ -1.71
Col3a1P08121 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Col3a1P08121 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC4.36□□□□□ -1.71
Col3a1P08121 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC4.36□□□□□ -1.71
Col3a1P08121 Gm38213-201ENSMUST00000193203 173 ntBASIC4.36□□□□□ -1.71
Col3a1P08121 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC4.36□□□□□ -1.71
Col3a1P08121 Gm18747-201ENSMUST00000198129 648 ntBASIC4.36□□□□□ -1.71
Col3a1P08121 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC4.36□□□□□ -1.71
Col3a1P08121 Gm35876-201ENSMUST00000205044 459 ntBASIC4.36□□□□□ -1.71
Col3a1P08121 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC4.36□□□□□ -1.71
Col3a1P08121 AC142499.1-201ENSMUST00000220036 374 ntBASIC4.36□□□□□ -1.71
Col3a1P08121 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.36□□□□□ -1.71
Col3a1P08121 AC154738.4-201ENSMUST00000228310 414 ntBASIC4.36□□□□□ -1.71
Col3a1P08121 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Col3a1P08121 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Col3a1P08121 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col3a1P08121 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Col3a1P08121 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
Col3a1P08121 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Col3a1P08121 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.35□□□□□ -1.71
Col3a1P08121 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Col3a1P08121 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col3a1P08121 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Col3a1P08121 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col3a1P08121 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
Col3a1P08121 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
Col3a1P08121 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col3a1P08121 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col3a1P08121 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.35□□□□□ -1.71
Col3a1P08121 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Col3a1P08121 Gm14932-201ENSMUST00000117112 453 ntBASIC4.35□□□□□ -1.71
Col3a1P08121 Gm13170-201ENSMUST00000119716 643 ntBASIC4.35□□□□□ -1.71
Col3a1P08121 Gm9001-201ENSMUST00000121642 399 ntBASIC4.35□□□□□ -1.71
Col3a1P08121 n-R5s179-201ENSMUST00000122564 118 ntBASIC4.35□□□□□ -1.71
Col3a1P08121 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Col3a1P08121 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC4.35□□□□□ -1.71
Col3a1P08121 Gm38088-201ENSMUST00000195829 241 ntBASIC4.35□□□□□ -1.71
Col3a1P08121 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC4.35□□□□□ -1.71
Col3a1P08121 Gm43004-201ENSMUST00000201872 703 ntBASIC4.35□□□□□ -1.71
Col3a1P08121 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Col3a1P08121 Gm46103-201ENSMUST00000217614 341 ntBASIC4.35□□□□□ -1.71
Col3a1P08121 Gm21007-201ENSMUST00000221024 326 ntBASIC4.35□□□□□ -1.71
Col3a1P08121 AC154851.2-201ENSMUST00000222172 644 ntBASIC4.35□□□□□ -1.71
Col3a1P08121 AC121960.3-201ENSMUST00000227077 623 ntBASIC4.35□□□□□ -1.71
Col3a1P08121 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col3a1P08121 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Col3a1P08121 Gm6369-201ENSMUST00000069626 412 ntBASIC4.35□□□□□ -1.71
Col3a1P08121 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Col3a1P08121 Gm43715-201ENSMUST00000196307 2715 ntBASIC4.35□□□□□ -1.71
Col3a1P08121 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.35□□□□□ -1.71
Col3a1P08121 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC4.35□□□□□ -1.71
Col3a1P08121 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Col3a1P08121 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC4.34□□□□□ -1.71
Col3a1P08121 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
Col3a1P08121 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col3a1P08121 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col3a1P08121 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Col3a1P08121 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Col3a1P08121 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Col3a1P08121 Gm17132-201ENSMUST00000109542 1158 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 Gm25848-201ENSMUST00000116790 144 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 Gm11408-201ENSMUST00000117889 519 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 Gm14358-201ENSMUST00000118458 403 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 Mir1903-201ENSMUST00000122574 80 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Col3a1P08121 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC4.34□□□□□ -1.71
Col3a1P08121 Gm23123-201ENSMUST00000157648 144 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 Gm24727-201ENSMUST00000158231 144 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Col3a1P08121 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Col3a1P08121 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Col3a1P08121 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
Col3a1P08121 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Col3a1P08121 Mir6715-201ENSMUST00000184990 57 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 Gm28591-201ENSMUST00000185259 183 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC4.34□□□□□ -1.71
Col3a1P08121 Gm37698-201ENSMUST00000192605 463 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 Mir7682-201ENSMUST00000198467 58 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Col3a1P08121 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC4.34□□□□□ -1.71
Col3a1P08121 Gm9712-201ENSMUST00000210842 311 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC4.34□□□□□ -1.71
Col3a1P08121 AC122901.2-201ENSMUST00000216926 285 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 AC211878.5-201ENSMUST00000221697 409 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 AC154184.2-201ENSMUST00000225335 349 ntBASIC4.34□□□□□ -1.71
Col3a1P08121 AC116395.1-201ENSMUST00000225480 1143 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms