Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm12106-201ENSMUST00000116006 1200 ntBASIC3.02□□□□□ -1.93
Col5a1O88207 Gm24787-201ENSMUST00000157380 123 ntBASIC3.02□□□□□ -1.93
Col5a1O88207 Gm4222-201ENSMUST00000165784 470 ntBASIC3.02□□□□□ -1.93
Col5a1O88207 Mir5118-201ENSMUST00000175551 67 ntBASIC3.02□□□□□ -1.93
Col5a1O88207 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
Col5a1O88207 Mir6413-201ENSMUST00000184049 108 ntBASIC3.02□□□□□ -1.93
Col5a1O88207 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
Col5a1O88207 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Col5a1O88207 Gm8423-201ENSMUST00000211387 607 ntBASIC3.02□□□□□ -1.93
Col5a1O88207 AC171206.1-201ENSMUST00000213612 213 ntBASIC3.02□□□□□ -1.93
Col5a1O88207 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.02□□□□□ -1.93
Col5a1O88207 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Col5a1O88207 Gm42455-201ENSMUST00000199761 2736 ntBASIC3.02□□□□□ -1.93
Col5a1O88207 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col5a1O88207 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Col5a1O88207 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.02□□□□□ -1.93
Col5a1O88207 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Col5a1O88207 AC154368.2-201ENSMUST00000222334 1724 ntBASIC3.02□□□□□ -1.93
Col5a1O88207 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col5a1O88207 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.01□□□□□ -1.93
Col5a1O88207 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.01□□□□□ -1.93
Col5a1O88207 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Col5a1O88207 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Col5a1O88207 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Col5a1O88207 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Col5a1O88207 Gm11321-201ENSMUST00000121257 902 ntBASIC3.01□□□□□ -1.93
Col5a1O88207 Gm12001-201ENSMUST00000121727 913 ntBASIC3.01□□□□□ -1.93
Col5a1O88207 Gm24937-201ENSMUST00000122597 134 ntBASIC3.01□□□□□ -1.93
Col5a1O88207 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.01□□□□□ -1.93
Col5a1O88207 Gm22722-201ENSMUST00000157467 132 ntBASIC3.01□□□□□ -1.93
Col5a1O88207 Gm22833-201ENSMUST00000158292 132 ntBASIC3.01□□□□□ -1.93
Col5a1O88207 Gm26238-201ENSMUST00000175538 117 ntBASIC3.01□□□□□ -1.93
Col5a1O88207 Gm20672-201ENSMUST00000176605 261 ntBASIC3.01□□□□□ -1.93
Col5a1O88207 Gm42581-201ENSMUST00000201774 966 ntBASIC3.01□□□□□ -1.93
Col5a1O88207 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.01□□□□□ -1.93
Col5a1O88207 Gm7540-201ENSMUST00000219764 926 ntBASIC3.01□□□□□ -1.93
Col5a1O88207 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Col5a1O88207 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Col5a1O88207 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Col5a1O88207 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Col5a1O88207 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Col5a1O88207 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Col5a1O88207 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Col5a1O88207 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.01□□□□□ -1.93
Col5a1O88207 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Col5a1O88207 Gm14659-201ENSMUST00000117667 843 ntBASIC3□□□□□ -1.93
Col5a1O88207 Gm23617-201ENSMUST00000175410 95 ntBASIC3□□□□□ -1.93
Col5a1O88207 Gm18433-202ENSMUST00000195682 196 ntBASIC3□□□□□ -1.93
Col5a1O88207 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3□□□□□ -1.93
Col5a1O88207 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3□□□□□ -1.93
Col5a1O88207 Gm43371-201ENSMUST00000202838 1031 ntBASIC3□□□□□ -1.93
Col5a1O88207 Gm46436-201ENSMUST00000221851 1294 ntBASIC3□□□□□ -1.93
Col5a1O88207 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC3□□□□□ -1.93
Col5a1O88207 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Col5a1O88207 Gm15697-201ENSMUST00000121946 2902 ntBASIC3□□□□□ -1.93
Col5a1O88207 Gm38286-201ENSMUST00000195128 3105 ntBASIC3□□□□□ -1.93
Col5a1O88207 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Col5a1O88207 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Col5a1O88207 Gm42585-201ENSMUST00000198731 4020 ntBASIC3□□□□□ -1.93
Col5a1O88207 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3□□□□□ -1.93
Col5a1O88207 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Col5a1O88207 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Col5a1O88207 Gm44789-201ENSMUST00000207195 3101 ntBASIC3□□□□□ -1.93
Col5a1O88207 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Col5a1O88207 Gm24119-201ENSMUST00000103979 246 ntBASIC3□□□□□ -1.93
Col5a1O88207 Gm13122-201ENSMUST00000118380 453 ntBASIC3□□□□□ -1.93
Col5a1O88207 Gm7071-201ENSMUST00000120458 462 ntBASIC3□□□□□ -1.93
Col5a1O88207 n-R5s32-201ENSMUST00000122495 103 ntBASIC3□□□□□ -1.93
Col5a1O88207 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC3□□□□□ -1.93
Col5a1O88207 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Col5a1O88207 Gm13147-202ENSMUST00000177526 1173 ntBASIC3□□□□□ -1.93
Col5a1O88207 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC3□□□□□ -1.93
Col5a1O88207 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3□□□□□ -1.93
Col5a1O88207 Gm42539-201ENSMUST00000197009 308 ntBASIC3□□□□□ -1.93
Col5a1O88207 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC3□□□□□ -1.93
Col5a1O88207 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC3□□□□□ -1.93
Col5a1O88207 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC3□□□□□ -1.93
Col5a1O88207 Gm4057-201ENSMUST00000221407 368 ntBASIC3□□□□□ -1.93
Col5a1O88207 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC3□□□□□ -1.93
Col5a1O88207 CT010444.1-201ENSMUST00000219963 3845 ntBASIC2.99□□□□□ -1.93
Col5a1O88207 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
Col5a1O88207 Gm7709-201ENSMUST00000199391 1858 ntBASIC2.99□□□□□ -1.93
Col5a1O88207 Gm7470-201ENSMUST00000194219 2095 ntBASIC2.99□□□□□ -1.93
Col5a1O88207 Gm650-201ENSMUST00000144428 1551 ntBASIC2.99□□□□□ -1.93
Col5a1O88207 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Col5a1O88207 Gm3616-201ENSMUST00000174430 2514 ntBASIC2.99□□□□□ -1.93
Col5a1O88207 Gm3683-201ENSMUST00000175701 2513 ntBASIC2.99□□□□□ -1.93
Col5a1O88207 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Col5a1O88207 Gm14987-201ENSMUST00000117820 676 ntBASIC2.99□□□□□ -1.93
Col5a1O88207 Gm2892-201ENSMUST00000145537 711 ntBASIC2.99□□□□□ -1.93
Col5a1O88207 Gm4468-201ENSMUST00000170206 294 ntBASIC2.99□□□□□ -1.93
Col5a1O88207 Gm28877-201ENSMUST00000191349 604 ntBASIC2.99□□□□□ -1.93
Col5a1O88207 Gm37996-201ENSMUST00000191859 367 ntBASIC2.99□□□□□ -1.93
Col5a1O88207 Gm43521-201ENSMUST00000197838 255 ntBASIC2.99□□□□□ -1.93
Col5a1O88207 Gm43107-201ENSMUST00000198729 255 ntBASIC2.99□□□□□ -1.93
Col5a1O88207 Gm19726-201ENSMUST00000205008 240 ntBASIC2.99□□□□□ -1.93
Col5a1O88207 Gm46234-201ENSMUST00000218702 259 ntBASIC2.99□□□□□ -1.93
Col5a1O88207 Gm18441-201ENSMUST00000223539 617 ntBASIC2.99□□□□□ -1.93
Col5a1O88207 AC157572.3-201ENSMUST00000227288 303 ntBASIC2.99□□□□□ -1.93
Col5a1O88207 Gm4945-201ENSMUST00000075152 453 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms