Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm35262-201ENSMUST00000215133 267 ntBASIC4.14□□□□□ -1.75
Cbx4O55187 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.14□□□□□ -1.75
Cbx4O55187 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Cbx4O55187 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Cbx4O55187 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Cbx4O55187 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Cbx4O55187 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Cbx4O55187 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Cbx4O55187 Mir99a-201ENSMUST00000083596 65 ntBASIC4.14□□□□□ -1.75
Cbx4O55187 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.14□□□□□ -1.75
Cbx4O55187 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Cbx4O55187 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Cbx4O55187 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.14□□□□□ -1.75
Cbx4O55187 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Cbx4O55187 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Cbx4O55187 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Cbx4O55187 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
Cbx4O55187 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.14□□□□□ -1.75
Cbx4O55187 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Cbx4O55187 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Cbx4O55187 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
Cbx4O55187 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC4.13□□□□□ -1.75
Cbx4O55187 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Cbx4O55187 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Cbx4O55187 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Cbx4O55187 Gm24125-201ENSMUST00000104105 137 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Gm23226-201ENSMUST00000116927 103 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Cbx4O55187 Gm11698-201ENSMUST00000117948 455 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Gm14352-201ENSMUST00000119250 449 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Gm12340-201ENSMUST00000121617 462 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Gm23429-201ENSMUST00000122486 149 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Gm22960-201ENSMUST00000122517 104 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Gm22345-201ENSMUST00000122644 107 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Mup-ps2-201ENSMUST00000142602 533 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Gm14651-201ENSMUST00000147192 442 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Gm22390-201ENSMUST00000157588 325 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
Cbx4O55187 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Cbx4O55187 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Gm22395-201ENSMUST00000177427 96 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC4.13□□□□□ -1.75
Cbx4O55187 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.13□□□□□ -1.75
Cbx4O55187 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Cbx4O55187 Gm27861-201ENSMUST00000183920 214 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Gm29228-201ENSMUST00000185489 418 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.13□□□□□ -1.75
Cbx4O55187 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC4.13□□□□□ -1.75
Cbx4O55187 Gm7946-201ENSMUST00000203326 958 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Gm43925-201ENSMUST00000203498 206 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Gm45063-201ENSMUST00000203726 472 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC4.13□□□□□ -1.75
Cbx4O55187 Gm46146-201ENSMUST00000217483 346 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 AC132237.2-201ENSMUST00000221702 1209 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 CR974485.1-201ENSMUST00000222408 402 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 AC110380.1-201ENSMUST00000226987 389 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Cbx4O55187 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Cbx4O55187 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Cbx4O55187 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Cbx4O55187 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Gm23099-201ENSMUST00000083454 139 ntBASIC4.13□□□□□ -1.75
Cbx4O55187 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.13□□□□□ -1.75
Cbx4O55187 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.13□□□□□ -1.75
Cbx4O55187 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Cbx4O55187 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Cbx4O55187 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.12□□□□□ -1.75
Cbx4O55187 AC122357.2-201ENSMUST00000220732 1525 ntBASIC4.12□□□□□ -1.75
Cbx4O55187 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.12□□□□□ -1.75
Cbx4O55187 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.12□□□□□ -1.75
Cbx4O55187 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cbx4O55187 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cbx4O55187 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Cbx4O55187 Gm24608-201ENSMUST00000104381 136 ntBASIC4.12□□□□□ -1.75
Cbx4O55187 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cbx4O55187 Gm11488-201ENSMUST00000117277 863 ntBASIC4.12□□□□□ -1.75
Cbx4O55187 Gm12102-201ENSMUST00000118251 604 ntBASIC4.12□□□□□ -1.75
Cbx4O55187 Gm15951-201ENSMUST00000118377 400 ntBASIC4.12□□□□□ -1.75
Cbx4O55187 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC4.12□□□□□ -1.75
Cbx4O55187 Gm14591-201ENSMUST00000120407 518 ntBASIC4.12□□□□□ -1.75
Cbx4O55187 Gm15077-201ENSMUST00000122344 362 ntBASIC4.12□□□□□ -1.75
Cbx4O55187 Gm23212-201ENSMUST00000122718 60 ntBASIC4.12□□□□□ -1.75
Cbx4O55187 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cbx4O55187 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.12□□□□□ -1.75
Cbx4O55187 Gm16250-201ENSMUST00000148974 256 ntBASIC4.12□□□□□ -1.75
Cbx4O55187 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Cbx4O55187 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Cbx4O55187 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Cbx4O55187 Gm3191-201ENSMUST00000167139 346 ntBASIC4.12□□□□□ -1.75
Cbx4O55187 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC4.12□□□□□ -1.75
Cbx4O55187 Gm7870-201ENSMUST00000184467 616 ntBASIC4.12□□□□□ -1.75
Cbx4O55187 Gm27899-201ENSMUST00000184715 64 ntBASIC4.12□□□□□ -1.75
Cbx4O55187 Gm27414-201ENSMUST00000185033 381 ntBASIC4.12□□□□□ -1.75
Cbx4O55187 Gm38098-201ENSMUST00000194115 241 ntBASIC4.12□□□□□ -1.75
Cbx4O55187 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.12□□□□□ -1.75
Cbx4O55187 Gm44376-201ENSMUST00000197570 128 ntBASIC4.12□□□□□ -1.75
Cbx4O55187 Gm38395-201ENSMUST00000199904 830 ntBASIC4.12□□□□□ -1.75
Cbx4O55187 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
Cbx4O55187 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms