Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Hmgb3O54879 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Hmgb3O54879 CT030242.2-201ENSMUST00000221588 148 ntBASIC2.7□□□□□ -1.98
Hmgb3O54879 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Hmgb3O54879 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Hmgb3O54879 AC154329.2-201ENSMUST00000225257 383 ntBASIC2.7□□□□□ -1.98
Hmgb3O54879 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.7□□□□□ -1.98
Hmgb3O54879 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Hmgb3O54879 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Hmgb3O54879 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Hmgb3O54879 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Hmgb3O54879 Gm44800-201ENSMUST00000207510 1855 ntBASIC2.7□□□□□ -1.98
Hmgb3O54879 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Hmgb3O54879 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Hmgb3O54879 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Hmgb3O54879 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 Gm42534-201ENSMUST00000196063 1754 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Hmgb3O54879 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Hmgb3O54879 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
Hmgb3O54879 Gm40020-201ENSMUST00000215677 1635 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 Gm44150-201ENSMUST00000203317 2619 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Hmgb3O54879 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Hmgb3O54879 Gm5757-201ENSMUST00000117494 528 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 Amd-ps1-201ENSMUST00000120127 994 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 Gm15014-201ENSMUST00000120742 258 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 Gm22480-201ENSMUST00000122568 128 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Hmgb3O54879 Gm22120-201ENSMUST00000175590 70 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 Gm27189-201ENSMUST00000184119 190 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 Gm37343-201ENSMUST00000192542 111 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 Gm18529-201ENSMUST00000193025 1257 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 Gm43227-201ENSMUST00000202239 677 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 Gm18225-201ENSMUST00000216708 742 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 AC154851.2-201ENSMUST00000222172 644 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Hmgb3O54879 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Hmgb3O54879 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC2.69□□□□□ -1.98
Hmgb3O54879 Gm10237-201ENSMUST00000078393 273 ntBASIC2.69□□□□□ -1.98
Hmgb3O54879 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
Hmgb3O54879 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Hmgb3O54879 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC2.69□□□□□ -1.98
Hmgb3O54879 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Hmgb3O54879 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Hmgb3O54879 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.68□□□□□ -1.98
Hmgb3O54879 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Hmgb3O54879 Gm13567-201ENSMUST00000118026 247 ntBASIC2.68□□□□□ -1.98
Hmgb3O54879 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.68□□□□□ -1.98
Hmgb3O54879 Gm16331-201ENSMUST00000144274 498 ntBASIC2.68□□□□□ -1.98
Hmgb3O54879 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC2.68□□□□□ -1.98
Hmgb3O54879 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC2.68□□□□□ -1.98
Hmgb3O54879 Gm23023-201ENSMUST00000158767 109 ntBASIC2.68□□□□□ -1.98
Hmgb3O54879 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Hmgb3O54879 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC2.68□□□□□ -1.98
Hmgb3O54879 Mir6393-201ENSMUST00000183709 94 ntBASIC2.68□□□□□ -1.98
Hmgb3O54879 Gm18406-201ENSMUST00000185872 669 ntBASIC2.68□□□□□ -1.98
Hmgb3O54879 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC2.68□□□□□ -1.98
Hmgb3O54879 Trbv8-201ENSMUST00000194020 285 ntBASIC2.68□□□□□ -1.98
Hmgb3O54879 Gm43239-201ENSMUST00000200131 201 ntBASIC2.68□□□□□ -1.98
Hmgb3O54879 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC2.68□□□□□ -1.98
Hmgb3O54879 Gm44583-201ENSMUST00000207478 281 ntBASIC2.68□□□□□ -1.98
Hmgb3O54879 Gm5339-201ENSMUST00000210551 1102 ntBASIC2.68□□□□□ -1.98
Hmgb3O54879 Gm45312-201ENSMUST00000210566 311 ntBASIC2.68□□□□□ -1.98
Hmgb3O54879 Gm45379-201ENSMUST00000211772 549 ntBASIC2.68□□□□□ -1.98
Hmgb3O54879 Gm3213-201ENSMUST00000219296 441 ntBASIC2.68□□□□□ -1.98
Hmgb3O54879 AC158536.1-201ENSMUST00000222510 256 ntBASIC2.68□□□□□ -1.98
Hmgb3O54879 AC124433.2-201ENSMUST00000223867 291 ntBASIC2.68□□□□□ -1.98
Hmgb3O54879 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.68□□□□□ -1.98
Hmgb3O54879 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Hmgb3O54879 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Hmgb3O54879 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
Hmgb3O54879 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Hmgb3O54879 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Hmgb3O54879 Gm42614-201ENSMUST00000198724 1554 ntBASIC2.68□□□□□ -1.98
Hmgb3O54879 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
Hmgb3O54879 Gm14421-201ENSMUST00000121755 1958 ntBASIC2.68□□□□□ -1.98
Hmgb3O54879 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Hmgb3O54879 Gm21379-201ENSMUST00000179772 1955 ntBASIC2.68□□□□□ -1.98
Hmgb3O54879 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Hmgb3O54879 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC2.68□□□□□ -1.98
Hmgb3O54879 AC149294.7-201ENSMUST00000227475 1432 ntBASIC2.68□□□□□ -1.98
Hmgb3O54879 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Hmgb3O54879 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
Hmgb3O54879 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Hmgb3O54879 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Hmgb3O54879 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
Hmgb3O54879 Gm23481-201ENSMUST00000104173 131 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 Gm24469-201ENSMUST00000104487 131 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 Gm14811-201ENSMUST00000117070 117 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 Gm12568-201ENSMUST00000117362 624 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 Gm12025-201ENSMUST00000117768 144 ntBASIC2.67□□□□□ -1.98
Hmgb3O54879 Gm13379-201ENSMUST00000118053 621 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms