Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC3.62□□□□□ -1.83
Trav13d-3J3QMG8 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Trav13d-3J3QMG8 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.62□□□□□ -1.83
Trav13d-3J3QMG8 AC154738.2-201ENSMUST00000227403 1110 ntBASIC3.62□□□□□ -1.83
Trav13d-3J3QMG8 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Trav13d-3J3QMG8 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trav13d-3J3QMG8 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.62□□□□□ -1.83
Trav13d-3J3QMG8 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trav13d-3J3QMG8 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trav13d-3J3QMG8 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC3.62□□□□□ -1.83
Trav13d-3J3QMG8 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trav13d-3J3QMG8 Gm24921-201ENSMUST00000083024 107 ntBASIC3.62□□□□□ -1.83
Trav13d-3J3QMG8 Olfr203-201ENSMUST00000089305 924 ntBASIC3.62□□□□□ -1.83
Trav13d-3J3QMG8 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trav13d-3J3QMG8 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Trav13d-3J3QMG8 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trav13d-3J3QMG8 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Trav13d-3J3QMG8 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm15108-201ENSMUST00000116160 803 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm16431-201ENSMUST00000117454 431 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm6591-201ENSMUST00000121063 434 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm4852-201ENSMUST00000121202 729 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm6182-201ENSMUST00000156439 1208 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm25965-201ENSMUST00000157170 93 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm26036-201ENSMUST00000158149 144 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm23023-201ENSMUST00000158767 109 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm23312-201ENSMUST00000158774 102 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm6486-201ENSMUST00000166202 434 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm5473-201ENSMUST00000179326 642 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Mir6986-201ENSMUST00000184483 58 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm27286-201ENSMUST00000184934 179 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm28685-201ENSMUST00000187545 1101 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm19214-201ENSMUST00000191956 1083 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm7142-201ENSMUST00000194232 586 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm35212-201ENSMUST00000196672 606 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm42458-201ENSMUST00000201914 369 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm44583-201ENSMUST00000207478 281 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm46146-201ENSMUST00000217483 346 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 AC153529.1-201ENSMUST00000217818 370 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 AC141642.1-201ENSMUST00000220598 229 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 AC154738.5-201ENSMUST00000227397 310 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 AC158142.2-201ENSMUST00000227892 635 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm23939-201ENSMUST00000082880 133 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm37461-201ENSMUST00000193929 3704 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trav13d-3J3QMG8 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trav13d-3J3QMG8 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trav13d-3J3QMG8 Gm42552-201ENSMUST00000196754 4497 ntBASIC3.6□□□□□ -1.83
Trav13d-3J3QMG8 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.6□□□□□ -1.83
Trav13d-3J3QMG8 Gm37329-201ENSMUST00000192973 2057 ntBASIC3.6□□□□□ -1.83
Trav13d-3J3QMG8 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trav13d-3J3QMG8 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trav13d-3J3QMG8 Mir761-201ENSMUST00000103245 76 ntBASIC3.6□□□□□ -1.83
Trav13d-3J3QMG8 Gm23322-201ENSMUST00000104464 167 ntBASIC3.6□□□□□ -1.83
Trav13d-3J3QMG8 Gm25726-201ENSMUST00000104529 129 ntBASIC3.6□□□□□ -1.83
Trav13d-3J3QMG8 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Trav13d-3J3QMG8 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trav13d-3J3QMG8 Gm4596-201ENSMUST00000117197 442 ntBASIC3.6□□□□□ -1.83
Trav13d-3J3QMG8 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC3.6□□□□□ -1.83
Trav13d-3J3QMG8 Gm15195-201ENSMUST00000118775 263 ntBASIC3.6□□□□□ -1.83
Trav13d-3J3QMG8 Gm2318-201ENSMUST00000119623 639 ntBASIC3.6□□□□□ -1.83
Trav13d-3J3QMG8 Gm12607-201ENSMUST00000120724 493 ntBASIC3.6□□□□□ -1.83
Trav13d-3J3QMG8 Gm2768-201ENSMUST00000121062 250 ntBASIC3.6□□□□□ -1.83
Trav13d-3J3QMG8 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trav13d-3J3QMG8 Gm11281-201ENSMUST00000141391 576 ntBASIC3.6□□□□□ -1.83
Trav13d-3J3QMG8 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms