Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm12765-201ENSMUST00000117273 615 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm13681-201ENSMUST00000117925 210 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm15012-201ENSMUST00000119176 106 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm12787-201ENSMUST00000119234 396 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm25150-201ENSMUST00000157121 60 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm25339-201ENSMUST00000157458 232 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm25430-201ENSMUST00000157614 289 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm23121-201ENSMUST00000157653 173 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Mir3095-201ENSMUST00000175552 87 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm18828-202ENSMUST00000181035 310 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm27528-201ENSMUST00000183544 205 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm9320-201ENSMUST00000184151 473 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm27818-201ENSMUST00000184536 159 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm28781-201ENSMUST00000185760 696 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm28847-201ENSMUST00000186778 700 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm6075-201ENSMUST00000186816 486 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm29307-201ENSMUST00000187367 696 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm29339-201ENSMUST00000189613 696 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm21088-201ENSMUST00000190875 316 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm29407-201ENSMUST00000191468 696 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm37682-201ENSMUST00000191776 522 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm2147-201ENSMUST00000193588 639 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm43214-201ENSMUST00000199242 352 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Mir219c-201ENSMUST00000199860 60 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm44817-201ENSMUST00000205416 453 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm24764-201ENSMUST00000083686 199 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm43784-201ENSMUST00000202922 2436 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm11486-201ENSMUST00000107322 478 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm11346-201ENSMUST00000118346 704 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm16216-201ENSMUST00000118970 1111 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm11830-201ENSMUST00000120175 561 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm14761-201ENSMUST00000121363 262 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm12936-201ENSMUST00000121439 301 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm14695-201ENSMUST00000121721 282 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm13406-201ENSMUST00000121991 256 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm25176-201ENSMUST00000122640 125 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm22073-201ENSMUST00000122668 189 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm23225-201ENSMUST00000158121 114 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm24944-201ENSMUST00000158330 128 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm22085-201ENSMUST00000158344 110 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm25489-201ENSMUST00000158727 141 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm7925-201ENSMUST00000166690 401 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm29228-201ENSMUST00000185489 418 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm2914-201ENSMUST00000186120 328 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm28629-201ENSMUST00000187309 263 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm37616-201ENSMUST00000193974 322 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm4321-201ENSMUST00000200520 442 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms