Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Atf6F6VAN0 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.38□□□□□ -1.55
Atf6F6VAN0 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Atf6F6VAN0 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Atf6F6VAN0 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Atf6F6VAN0 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Atf6F6VAN0 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Atf6F6VAN0 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Atf6F6VAN0 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.38□□□□□ -1.55
Atf6F6VAN0 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm24350-201ENSMUST00000104163 133 ntBASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm11970-201ENSMUST00000116105 320 ntBASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm15428-201ENSMUST00000121352 333 ntBASIC5.38□□□□□ -1.55
Atf6F6VAN0 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm22804-201ENSMUST00000158052 101 ntBASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm20657-201ENSMUST00000177079 515 ntBASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm8600-201ENSMUST00000186320 905 ntBASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm7266-201ENSMUST00000187999 405 ntBASIC5.38□□□□□ -1.55
Atf6F6VAN0 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm36939-201ENSMUST00000194889 439 ntBASIC5.38□□□□□ -1.55
Atf6F6VAN0 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm43919-201ENSMUST00000204303 364 ntBASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm17737-201ENSMUST00000210183 1147 ntBASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm45434-201ENSMUST00000210550 293 ntBASIC5.38□□□□□ -1.55
Atf6F6VAN0 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC5.38□□□□□ -1.55
Atf6F6VAN0 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC5.38□□□□□ -1.55
Atf6F6VAN0 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm23459-201ENSMUST00000083259 131 ntBASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm24610-201ENSMUST00000083270 109 ntBASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm16261-201ENSMUST00000096813 205 ntBASIC5.38□□□□□ -1.55
Atf6F6VAN0 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Atf6F6VAN0 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Atf6F6VAN0 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Atf6F6VAN0 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Atf6F6VAN0 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Atf6F6VAN0 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.37□□□□□ -1.55
Atf6F6VAN0 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.37□□□□□ -1.55
Atf6F6VAN0 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
Atf6F6VAN0 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
Atf6F6VAN0 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Atf6F6VAN0 Gm23910-201ENSMUST00000104597 132 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 Gm14355-201ENSMUST00000117352 264 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 Gm9429-201ENSMUST00000117804 868 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 Gm12074-201ENSMUST00000120189 219 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 Gm12087-201ENSMUST00000121878 258 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.37□□□□□ -1.55
Atf6F6VAN0 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Atf6F6VAN0 Gm14333-201ENSMUST00000130484 264 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 Gm23901-201ENSMUST00000157570 107 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 Gm23354-201ENSMUST00000158426 104 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 Gm26430-201ENSMUST00000178054 107 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 Gm4761-201ENSMUST00000178086 582 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Atf6F6VAN0 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.37□□□□□ -1.55
Atf6F6VAN0 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.37□□□□□ -1.55
Atf6F6VAN0 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Atf6F6VAN0 Gm27928-201ENSMUST00000183747 256 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.37□□□□□ -1.55
Atf6F6VAN0 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC5.37□□□□□ -1.55
Atf6F6VAN0 Gm22897-202ENSMUST00000197782 127 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 Gm43804-201ENSMUST00000198280 456 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC5.37□□□□□ -1.55
Atf6F6VAN0 Gm44765-201ENSMUST00000206927 601 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 CT030705.1-201ENSMUST00000223971 533 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 AC173482.5-201ENSMUST00000224181 327 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Atf6F6VAN0 AC155237.2-201ENSMUST00000228487 478 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 Mir449a-201ENSMUST00000083641 91 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Atf6F6VAN0 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Atf6F6VAN0 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Atf6F6VAN0 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.37□□□□□ -1.55
Atf6F6VAN0 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Atf6F6VAN0 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Atf6F6VAN0 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Atf6F6VAN0 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.36□□□□□ -1.55
Atf6F6VAN0 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Atf6F6VAN0 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
Atf6F6VAN0 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Atf6F6VAN0 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Atf6F6VAN0 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.36□□□□□ -1.55
Atf6F6VAN0 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Atf6F6VAN0 Gm44678-201ENSMUST00000207828 2775 ntBASIC5.36□□□□□ -1.55
Atf6F6VAN0 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Atf6F6VAN0 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms