Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 Gm8874-201ENSMUST00000196826 286 ntBASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 AC137902.2-201ENSMUST00000227989 576 ntBASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Gm14714-201ENSMUST00000119743 439 ntBASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Gm25116-201ENSMUST00000157191 122 ntBASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Gm16134-201ENSMUST00000161714 336 ntBASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 AC129017.1-201ENSMUST00000228363 270 ntBASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Gm11262-201ENSMUST00000119326 833 ntBASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Gm9225-201ENSMUST00000121921 836 ntBASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Gm8338-201ENSMUST00000163928 363 ntBASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Gm36991-201ENSMUST00000191800 648 ntBASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Gm37329-201ENSMUST00000192973 2057 ntBASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Gm24096-201ENSMUST00000103905 110 ntBASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Gm17711-201ENSMUST00000172028 237 ntBASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col6a3E9PWQ3 Gm43092-201ENSMUST00000202986 1854 ntBASIC3.09□□□□□ -1.91
Col6a3E9PWQ3 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Col6a3E9PWQ3 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC3.09□□□□□ -1.91
Col6a3E9PWQ3 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC3.09□□□□□ -1.91
Col6a3E9PWQ3 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Col6a3E9PWQ3 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Col6a3E9PWQ3 Gm13924-201ENSMUST00000119899 486 ntBASIC3.09□□□□□ -1.91
Col6a3E9PWQ3 Gm46389-201ENSMUST00000223199 392 ntBASIC3.09□□□□□ -1.91
Col6a3E9PWQ3 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.09□□□□□ -1.91
Col6a3E9PWQ3 AC134864.1-201ENSMUST00000226326 511 ntBASIC3.09□□□□□ -1.91
Col6a3E9PWQ3 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Col6a3E9PWQ3 Gm43341-201ENSMUST00000200104 1308 ntBASIC3.09□□□□□ -1.91
Col6a3E9PWQ3 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Col6a3E9PWQ3 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.09□□□□□ -1.91
Col6a3E9PWQ3 Gm28362-201ENSMUST00000189430 2420 ntBASIC3.09□□□□□ -1.91
Col6a3E9PWQ3 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
Col6a3E9PWQ3 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC3.09□□□□□ -1.92
Col6a3E9PWQ3 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Col6a3E9PWQ3 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.92
Col6a3E9PWQ3 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
Col6a3E9PWQ3 Gm13588-201ENSMUST00000120026 135 ntBASIC3.09□□□□□ -1.92
Col6a3E9PWQ3 Gm25488-201ENSMUST00000158728 118 ntBASIC3.09□□□□□ -1.92
Col6a3E9PWQ3 Gm18595-201ENSMUST00000175736 1068 ntBASIC3.09□□□□□ -1.92
Col6a3E9PWQ3 Gm38076-201ENSMUST00000193889 450 ntBASIC3.09□□□□□ -1.92
Col6a3E9PWQ3 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC3.09□□□□□ -1.92
Col6a3E9PWQ3 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.09□□□□□ -1.92
Col6a3E9PWQ3 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Gm5268-201ENSMUST00000189212 940 ntBASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Gm28639-201ENSMUST00000191519 481 ntBASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 AC166358.4-201ENSMUST00000223030 105 ntBASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Gm37531-201ENSMUST00000191628 5415 ntBASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Gm28146-201ENSMUST00000185517 701 ntBASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Gm10025-201ENSMUST00000079568 372 ntBASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.08□□□□□ -1.92
Col6a3E9PWQ3 Gm23128-201ENSMUST00000104257 132 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms