Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
Col4a6B1AVK5 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Col4a6B1AVK5 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.88
Col4a6B1AVK5 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
Col4a6B1AVK5 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Gm24664-201ENSMUST00000158939 100 ntBASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Gm42850-201ENSMUST00000202094 201 ntBASIC3.33□□□□□ -1.88
Col4a6B1AVK5 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col4a6B1AVK5 n-R5s205-201ENSMUST00000083149 125 ntBASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Gm13615-201ENSMUST00000120242 1612 ntBASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Gm8569-201ENSMUST00000117630 647 ntBASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Gm13167-201ENSMUST00000118554 578 ntBASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Gm13438-201ENSMUST00000120100 573 ntBASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Gm26477-201ENSMUST00000122617 323 ntBASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Gm25004-201ENSMUST00000083811 161 ntBASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Col4a6B1AVK5 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Gm12568-201ENSMUST00000117362 624 ntBASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Gm12261-201ENSMUST00000117499 645 ntBASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Gm13379-201ENSMUST00000118053 621 ntBASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Gm10075-201ENSMUST00000162030 545 ntBASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Gm24369-201ENSMUST00000175387 96 ntBASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Mir3965-201ENSMUST00000175570 69 ntBASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Gm28967-201ENSMUST00000187351 281 ntBASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Gm20162-201ENSMUST00000193629 871 ntBASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Gm6064-201ENSMUST00000203999 454 ntBASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Gm8319-201ENSMUST00000205708 641 ntBASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Gm4057-201ENSMUST00000221407 368 ntBASIC3.32□□□□□ -1.88
Col4a6B1AVK5 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Gm12667-201ENSMUST00000118299 1332 ntBASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col4a6B1AVK5 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col4a6B1AVK5 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col4a6B1AVK5 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col4a6B1AVK5 Gm22988-201ENSMUST00000122759 144 ntBASIC3.31□□□□□ -1.88
Col4a6B1AVK5 Gm24930-201ENSMUST00000158315 83 ntBASIC3.31□□□□□ -1.88
Col4a6B1AVK5 Gm22666-201ENSMUST00000158717 164 ntBASIC3.31□□□□□ -1.88
Col4a6B1AVK5 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC3.31□□□□□ -1.88
Col4a6B1AVK5 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col4a6B1AVK5 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.31□□□□□ -1.88
Col4a6B1AVK5 Gm18441-201ENSMUST00000223539 617 ntBASIC3.31□□□□□ -1.88
Col4a6B1AVK5 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col4a6B1AVK5 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col4a6B1AVK5 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col4a6B1AVK5 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col4a6B1AVK5 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.31□□□□□ -1.88
Col4a6B1AVK5 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Col4a6B1AVK5 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
Col4a6B1AVK5 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col4a6B1AVK5 Gm23011-201ENSMUST00000104148 132 ntBASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Gm12858-201ENSMUST00000121913 208 ntBASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Gm25456-201ENSMUST00000157952 109 ntBASIC3.3□□□□□ -1.88
Col4a6B1AVK5 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Gm37966-201ENSMUST00000193122 326 ntBASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Gm45317-201ENSMUST00000210385 223 ntBASIC3.3□□□□□ -1.88
Col4a6B1AVK5 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Gm13122-201ENSMUST00000118380 453 ntBASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Gm12387-201ENSMUST00000118573 955 ntBASIC3.3□□□□□ -1.88
Col4a6B1AVK5 Gm8260-201ENSMUST00000119230 353 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms