Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm9845-201ENSMUST00000056409 598 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm43718-201ENSMUST00000197524 1857 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm24289-201ENSMUST00000157629 135 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm38217-201ENSMUST00000194358 910 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Snord59a-201ENSMUST00000082844 74 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Mir448-201ENSMUST00000083516 112 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm15536-201ENSMUST00000121411 114 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm21842-201ENSMUST00000177552 498 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm21626-201ENSMUST00000177791 498 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm21562-201ENSMUST00000177888 498 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm21539-201ENSMUST00000177925 498 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm17522-201ENSMUST00000178144 498 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm21599-201ENSMUST00000178249 498 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm21914-201ENSMUST00000178452 498 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm21723-201ENSMUST00000178692 498 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm21916-201ENSMUST00000178771 498 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm21801-201ENSMUST00000178865 498 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm21633-201ENSMUST00000178941 498 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm17412-201ENSMUST00000179261 468 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm21821-201ENSMUST00000179646 498 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm21588-201ENSMUST00000180074 498 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm21780-201ENSMUST00000180128 498 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm21572-201ENSMUST00000180134 498 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm21529-201ENSMUST00000180175 498 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm29370-202ENSMUST00000187476 499 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm7984-201ENSMUST00000060640 538 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm38235-201ENSMUST00000194600 4952 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm45378-201ENSMUST00000211063 2711 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm25787-201ENSMUST00000104709 92 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm25847-201ENSMUST00000116793 96 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm13082-201ENSMUST00000118877 561 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm13692-201ENSMUST00000120774 371 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm38264-201ENSMUST00000194850 2032 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Mup-ps14-201ENSMUST00000118437 532 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm23791-201ENSMUST00000122553 293 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Mup-ps2-201ENSMUST00000142602 533 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm25116-201ENSMUST00000157191 122 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm24914-201ENSMUST00000157285 313 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm38283-201ENSMUST00000193041 695 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm18748-201ENSMUST00000198507 622 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Ubr4A2AN08 AC129017.1-201ENSMUST00000228363 270 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm11229-201ENSMUST00000121993 437 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm23783-201ENSMUST00000157941 102 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm7214-201ENSMUST00000222428 272 ntBASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Ubr4A2AN08 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms