Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm18855-201ENSMUST00000206689 570 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Gm45316-201ENSMUST00000210128 162 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Trem1Q9JKE2 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Gm18704-201ENSMUST00000219736 446 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 AC122924.1-201ENSMUST00000222044 163 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 AC139750.2-201ENSMUST00000224424 386 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 AC163664.1-201ENSMUST00000226251 1248 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Gm37668-201ENSMUST00000193745 1944 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Gm24578-201ENSMUST00000103970 129 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Mir294-201ENSMUST00000104710 84 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Gm11367-201ENSMUST00000117802 120 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Gm14534-201ENSMUST00000120045 357 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Gm23183-201ENSMUST00000122595 323 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Gm25264-201ENSMUST00000158519 117 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Gm4761-201ENSMUST00000178086 582 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Gm27190-201ENSMUST00000184890 542 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Gm44274-201ENSMUST00000203417 256 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Gm44952-201ENSMUST00000204443 433 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Gm18644-201ENSMUST00000211458 815 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Gm8942-201ENSMUST00000217892 400 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.37□□□□□ -1.87
Trem1Q9JKE2 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 CT025552.2-201ENSMUST00000225497 317 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 AC122357.2-201ENSMUST00000220732 1525 ntBASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Trem1Q9JKE2 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Gm25919-201ENSMUST00000104271 132 ntBASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Gm24788-201ENSMUST00000104283 156 ntBASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Gm14880-201ENSMUST00000117581 292 ntBASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Gm14916-201ENSMUST00000121904 204 ntBASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Gm14162-201ENSMUST00000121985 601 ntBASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Gm5958-201ENSMUST00000147698 297 ntBASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Gm3084-201ENSMUST00000169967 598 ntBASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Gm18604-201ENSMUST00000172535 558 ntBASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Gm27883-201ENSMUST00000183941 102 ntBASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Gm23925-202ENSMUST00000188429 132 ntBASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Gm10925-201ENSMUST00000189941 678 ntBASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.36□□□□□ -1.87
Trem1Q9JKE2 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC3.36□□□□□ -1.87
Trem1Q9JKE2 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Gm19134-201ENSMUST00000221203 487 ntBASIC3.36□□□□□ -1.87
Trem1Q9JKE2 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trem1Q9JKE2 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trem1Q9JKE2 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trem1Q9JKE2 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trem1Q9JKE2 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Gm23431-201ENSMUST00000104006 107 ntBASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Gm24160-201ENSMUST00000104594 126 ntBASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Gm11898-201ENSMUST00000117161 385 ntBASIC3.35□□□□□ -1.87
Trem1Q9JKE2 Gm11698-201ENSMUST00000117948 455 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms