Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Otud1Q9CUB6 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.43□□□□□ -1.54
Otud1Q9CUB6 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Gm14915-201ENSMUST00000120747 204 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Gm6175-201ENSMUST00000121351 400 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Gm25152-201ENSMUST00000157117 114 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Gm23078-201ENSMUST00000157848 148 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Mir1945-201ENSMUST00000157919 78 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Gm6374-201ENSMUST00000159051 788 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Gm22650-201ENSMUST00000175138 105 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Mir3473g-201ENSMUST00000183494 136 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 AC156559.1-201ENSMUST00000224158 222 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Gm25204-201ENSMUST00000082843 106 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Gm22293-201ENSMUST00000083314 109 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Mir412-201ENSMUST00000083636 80 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Naip3-201ENSMUST00000118082 4208 ntBASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Otud1Q9CUB6 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.41□□□□□ -1.54
Otud1Q9CUB6 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm25538-201ENSMUST00000101943 107 ntBASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm12564-201ENSMUST00000119860 321 ntBASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm7670-201ENSMUST00000121272 641 ntBASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm12956-201ENSMUST00000122184 414 ntBASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm6081-201ENSMUST00000134472 489 ntBASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm22814-201ENSMUST00000157452 104 ntBASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm24240-201ENSMUST00000157785 135 ntBASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm24965-201ENSMUST00000157922 106 ntBASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm25489-201ENSMUST00000158727 141 ntBASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm17183-201ENSMUST00000171170 493 ntBASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Mir5110-201ENSMUST00000175537 87 ntBASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm22114-201ENSMUST00000177756 107 ntBASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm27887-201ENSMUST00000184367 102 ntBASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm37701-201ENSMUST00000192947 1100 ntBASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm9480-201ENSMUST00000198038 616 ntBASIC5.41□□□□□ -1.54
Otud1Q9CUB6 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 118.6 ms