Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Gm12568-201ENSMUST00000117362 624 ntBASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Gm13379-201ENSMUST00000118053 621 ntBASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Gm12401-201ENSMUST00000118435 228 ntBASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Gm12458-201ENSMUST00000119387 495 ntBASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Gm13687-201ENSMUST00000119857 282 ntBASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Gm14926-201ENSMUST00000120650 508 ntBASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Gm13868-201ENSMUST00000122411 294 ntBASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Gm23326-201ENSMUST00000157419 105 ntBASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Gm10075-201ENSMUST00000162030 545 ntBASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Gm24819-201ENSMUST00000175094 166 ntBASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Gm38334-201ENSMUST00000195060 313 ntBASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Gm45689-201ENSMUST00000210522 133 ntBASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Gm45814-201ENSMUST00000212646 775 ntBASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Snora7a-201ENSMUST00000082629 140 ntBASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Rpa3Q9CQ71 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm14622-201ENSMUST00000117117 468 ntBASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm15142-201ENSMUST00000121013 856 ntBASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm13460-201ENSMUST00000121274 353 ntBASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm2892-201ENSMUST00000145537 711 ntBASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm24289-201ENSMUST00000157629 135 ntBASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm9890-201ENSMUST00000171867 537 ntBASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Mir6914-201ENSMUST00000184999 69 ntBASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm28975-201ENSMUST00000186412 686 ntBASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm28654-201ENSMUST00000189801 379 ntBASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm20162-201ENSMUST00000193629 871 ntBASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm21006-201ENSMUST00000196930 667 ntBASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm5983-201ENSMUST00000197739 770 ntBASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm43405-201ENSMUST00000198642 337 ntBASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm36382-201ENSMUST00000198892 541 ntBASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm20074-201ENSMUST00000208144 484 ntBASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm18597-201ENSMUST00000209519 694 ntBASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm45420-201ENSMUST00000211243 425 ntBASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Rpa3Q9CQ71 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Gm25764-201ENSMUST00000104092 134 ntBASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Gm12276-201ENSMUST00000121709 301 ntBASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Gm26254-201ENSMUST00000122491 118 ntBASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Gm23441-201ENSMUST00000157268 127 ntBASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Gm43039-201ENSMUST00000202883 963 ntBASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Gm19726-201ENSMUST00000205008 240 ntBASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Gm18899-201ENSMUST00000217663 546 ntBASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Gm10237-201ENSMUST00000078393 273 ntBASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.49□□□□□ -1.85
Rpa3Q9CQ71 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms