Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
Clp1Q99LI9 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.7□□□□□ -1.5
Clp1Q99LI9 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.7□□□□□ -1.5
Clp1Q99LI9 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Clp1Q99LI9 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Clp1Q99LI9 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Clp1Q99LI9 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC5.7□□□□□ -1.5
Clp1Q99LI9 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.7□□□□□ -1.5
Clp1Q99LI9 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.7□□□□□ -1.5
Clp1Q99LI9 Gm22916-201ENSMUST00000157616 119 ntBASIC5.7□□□□□ -1.5
Clp1Q99LI9 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Clp1Q99LI9 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC5.7□□□□□ -1.5
Clp1Q99LI9 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC5.7□□□□□ -1.5
Clp1Q99LI9 Gm28163-201ENSMUST00000187099 325 ntBASIC5.7□□□□□ -1.5
Clp1Q99LI9 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Clp1Q99LI9 Rnu3a-202ENSMUST00000196710 213 ntBASIC5.7□□□□□ -1.5
Clp1Q99LI9 Gm3010-201ENSMUST00000198805 448 ntBASIC5.7□□□□□ -1.5
Clp1Q99LI9 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Clp1Q99LI9 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.7□□□□□ -1.5
Clp1Q99LI9 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC5.7□□□□□ -1.5
Clp1Q99LI9 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.7□□□□□ -1.5
Clp1Q99LI9 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Clp1Q99LI9 Rnu3a-201ENSMUST00000083936 214 ntBASIC5.7□□□□□ -1.5
Clp1Q99LI9 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Clp1Q99LI9 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Clp1Q99LI9 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Clp1Q99LI9 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.7□□□□□ -1.5
Clp1Q99LI9 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Clp1Q99LI9 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.7□□□□□ -1.5
Clp1Q99LI9 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Clp1Q99LI9 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.7□□□□□ -1.5
Clp1Q99LI9 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Clp1Q99LI9 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.7□□□□□ -1.5
Clp1Q99LI9 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm25537-201ENSMUST00000103851 109 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm26146-201ENSMUST00000104478 185 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm11673-201ENSMUST00000117846 331 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm11408-201ENSMUST00000117889 519 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm15142-201ENSMUST00000121013 856 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm14980-201ENSMUST00000121247 736 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm25339-201ENSMUST00000157458 232 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm24546-201ENSMUST00000158652 102 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Ear-ps12-201ENSMUST00000161720 451 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm3191-201ENSMUST00000167139 346 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm24518-201ENSMUST00000180275 94 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 Mir6413-201ENSMUST00000184049 108 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm27490-201ENSMUST00000184754 128 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm43115-201ENSMUST00000196244 160 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 AC174780.1-201ENSMUST00000199415 1107 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm7692-201ENSMUST00000213534 409 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Olfr151-202ENSMUST00000221099 929 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 AC166341.3-201ENSMUST00000221861 114 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm24522-201ENSMUST00000083964 108 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Clp1Q99LI9 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Gm21379-201ENSMUST00000179772 1955 ntBASIC5.69□□□□□ -1.5
Clp1Q99LI9 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clp1Q99LI9 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Clp1Q99LI9 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms