Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm13339-201ENSMUST00000120651 510 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm12607-201ENSMUST00000120724 493 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm13162-201ENSMUST00000121481 454 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm22204-201ENSMUST00000122654 327 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm5963-201ENSMUST00000143451 236 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm24751-201ENSMUST00000157844 102 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm26159-201ENSMUST00000158968 104 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm3030-201ENSMUST00000163410 516 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm17054-201ENSMUST00000169811 259 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm21754-201ENSMUST00000177550 479 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm27539-201ENSMUST00000184971 224 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm27414-201ENSMUST00000185033 381 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm28343-201ENSMUST00000185386 112 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm6501-201ENSMUST00000187178 916 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm43070-201ENSMUST00000196938 415 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Igkv12-49-201ENSMUST00000197714 278 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm43227-201ENSMUST00000202239 677 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm8774-201ENSMUST00000203621 692 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm45192-201ENSMUST00000206749 283 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm44909-201ENSMUST00000208756 165 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm29884-201ENSMUST00000218403 453 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 CT025552.2-201ENSMUST00000225497 317 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm24490-201ENSMUST00000083803 98 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm29730-201ENSMUST00000192986 1396 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm37397-201ENSMUST00000194579 2842 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Gm2033-201ENSMUST00000210753 2287 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Gm14293-201ENSMUST00000118528 577 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Gm15166-201ENSMUST00000120790 385 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Gm13932-201ENSMUST00000120873 610 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Ushbp1Q8R370 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Gm15796-201ENSMUST00000162135 204 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Gm17030-201ENSMUST00000167016 393 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Gm19203-201ENSMUST00000174049 939 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Gm7870-201ENSMUST00000184467 616 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Gm37828-201ENSMUST00000192496 432 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Gm38234-201ENSMUST00000195204 421 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Gm42465-201ENSMUST00000197036 492 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Gm44650-201ENSMUST00000206929 194 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Gm18258-201ENSMUST00000210413 542 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Gm18644-201ENSMUST00000211458 815 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Gm45530-201ENSMUST00000211658 225 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 AC160958.1-201ENSMUST00000224833 368 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Gm23464-201ENSMUST00000083145 147 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Gm23455-201ENSMUST00000083331 100 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Gm18913-201ENSMUST00000204311 1789 ntBASIC5.11□□□□□ -1.59
Ushbp1Q8R370 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm14982-201ENSMUST00000121102 442 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm13743-201ENSMUST00000121486 724 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Llph-ps2-201ENSMUST00000122000 393 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm14651-201ENSMUST00000147192 442 ntBASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ushbp1Q8R370 Gm23981-201ENSMUST00000157136 106 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms