Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Syne4Q8CII8 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm25727-201ENSMUST00000104522 131 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Syne4Q8CII8 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm15108-201ENSMUST00000116160 803 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm14899-201ENSMUST00000118673 548 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm14901-201ENSMUST00000119001 283 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm12016-201ENSMUST00000119079 681 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm13720-201ENSMUST00000120741 196 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm14473-201ENSMUST00000122269 557 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.8□□□□□ -1.64
Syne4Q8CII8 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm22314-201ENSMUST00000158007 281 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm23025-201ENSMUST00000158769 111 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm22120-201ENSMUST00000175590 70 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm26991-201ENSMUST00000180950 620 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Mir6408-201ENSMUST00000183643 91 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm8676-201ENSMUST00000184206 637 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm43489-201ENSMUST00000196810 993 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm42451-201ENSMUST00000197410 244 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm43036-201ENSMUST00000200594 373 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm43198-201ENSMUST00000200927 326 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.8□□□□□ -1.64
Syne4Q8CII8 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.8□□□□□ -1.64
Syne4Q8CII8 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.8□□□□□ -1.64
Syne4Q8CII8 AC154594.1-201ENSMUST00000225171 1273 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 AC160999.1-201ENSMUST00000225675 810 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm23302-201ENSMUST00000082710 100 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm23460-201ENSMUST00000083258 109 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Syne4Q8CII8 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Syne4Q8CII8 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.8□□□□□ -1.64
Syne4Q8CII8 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Syne4Q8CII8 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Syne4Q8CII8 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Syne4Q8CII8 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Syne4Q8CII8 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Syne4Q8CII8 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.79□□□□□ -1.64
Syne4Q8CII8 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Syne4Q8CII8 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Syne4Q8CII8 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Syne4Q8CII8 Gm12225-201ENSMUST00000117995 298 ntBASIC4.79□□□□□ -1.64
Syne4Q8CII8 Gm12571-201ENSMUST00000118132 243 ntBASIC4.79□□□□□ -1.64
Syne4Q8CII8 Gm14282-201ENSMUST00000119484 240 ntBASIC4.79□□□□□ -1.64
Syne4Q8CII8 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.79□□□□□ -1.64
Syne4Q8CII8 Gm22960-201ENSMUST00000122517 104 ntBASIC4.79□□□□□ -1.64
Syne4Q8CII8 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.79□□□□□ -1.64
Syne4Q8CII8 Gm24402-201ENSMUST00000157873 91 ntBASIC4.79□□□□□ -1.64
Syne4Q8CII8 Gm24190-201ENSMUST00000157976 216 ntBASIC4.79□□□□□ -1.64
Syne4Q8CII8 Mir6401-201ENSMUST00000184499 109 ntBASIC4.79□□□□□ -1.64
Syne4Q8CII8 Gm27538-201ENSMUST00000185065 294 ntBASIC4.79□□□□□ -1.64
Syne4Q8CII8 Gm6501-201ENSMUST00000187178 916 ntBASIC4.79□□□□□ -1.64
Syne4Q8CII8 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Syne4Q8CII8 Gm19224-201ENSMUST00000190477 793 ntBASIC4.79□□□□□ -1.64
Syne4Q8CII8 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
Syne4Q8CII8 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC4.79□□□□□ -1.64
Syne4Q8CII8 Gm20997-201ENSMUST00000205148 231 ntBASIC4.79□□□□□ -1.64
Syne4Q8CII8 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.79□□□□□ -1.64
Syne4Q8CII8 AL935138.1-201ENSMUST00000215309 196 ntBASIC4.79□□□□□ -1.64
Syne4Q8CII8 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Syne4Q8CII8 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.79□□□□□ -1.64
Syne4Q8CII8 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.79□□□□□ -1.64
Syne4Q8CII8 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Syne4Q8CII8 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Syne4Q8CII8 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Syne4Q8CII8 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
Syne4Q8CII8 Gm24150-201ENSMUST00000082759 104 ntBASIC4.79□□□□□ -1.64
Syne4Q8CII8 Gm25821-201ENSMUST00000093657 133 ntBASIC4.79□□□□□ -1.64
Syne4Q8CII8 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Syne4Q8CII8 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Syne4Q8CII8 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Syne4Q8CII8 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.79□□□□□ -1.64
Syne4Q8CII8 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Syne4Q8CII8 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.79□□□□□ -1.64
Syne4Q8CII8 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Syne4Q8CII8 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Syne4Q8CII8 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.78□□□□□ -1.64
Syne4Q8CII8 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Syne4Q8CII8 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Syne4Q8CII8 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.78□□□□□ -1.64
Syne4Q8CII8 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Syne4Q8CII8 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Syne4Q8CII8 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 103.8 ms