Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm8209-201ENSMUST00000206386 553 ntBASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm24403-201ENSMUST00000104616 130 ntBASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm14931-201ENSMUST00000111079 253 ntBASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm11898-201ENSMUST00000117161 385 ntBASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm14534-201ENSMUST00000120045 357 ntBASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm22988-201ENSMUST00000122759 144 ntBASIC4.49□□□□□ -1.69
Nup88Q8CEC0 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm23591-201ENSMUST00000157663 286 ntBASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm25981-201ENSMUST00000157921 295 ntBASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm16290-201ENSMUST00000161175 474 ntBASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm16147-201ENSMUST00000162143 373 ntBASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm27427-201ENSMUST00000185134 193 ntBASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm29598-201ENSMUST00000188996 588 ntBASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm38213-201ENSMUST00000193203 173 ntBASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm43659-201ENSMUST00000200894 628 ntBASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm44059-201ENSMUST00000204048 351 ntBASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm45200-201ENSMUST00000207434 919 ntBASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 CT030684.2-201ENSMUST00000228946 826 ntBASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm6369-201ENSMUST00000069626 412 ntBASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Mir370-201ENSMUST00000083499 79 ntBASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm5583-201ENSMUST00000174328 1519 ntBASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Gm6215-201ENSMUST00000119297 1386 ntBASIC4.49□□□□□ -1.69
Nup88Q8CEC0 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Nup88Q8CEC0 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Gm23431-201ENSMUST00000104006 107 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Gm11923-201ENSMUST00000118135 508 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Gm14605-201ENSMUST00000120599 268 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Gm14845-201ENSMUST00000121259 306 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Gm11645-201ENSMUST00000121589 649 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Gm14564-201ENSMUST00000122159 294 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Gm26276-201ENSMUST00000157099 109 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Gm26005-201ENSMUST00000158802 134 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Gm20526-201ENSMUST00000173416 158 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Gm6113-201ENSMUST00000180319 639 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Mir6715-201ENSMUST00000184990 57 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Gm2617-201ENSMUST00000185690 1066 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Gm38231-201ENSMUST00000192030 347 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Nup88Q8CEC0 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Gm44887-201ENSMUST00000208980 178 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Gm45551-201ENSMUST00000211459 928 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Nup88Q8CEC0 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Gm18120-201ENSMUST00000220079 511 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 AC129202.3-201ENSMUST00000224413 733 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Nup88Q8CEC0 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Gm25481-201ENSMUST00000083221 158 ntBASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Nup88Q8CEC0 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Nup88Q8CEC0 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.47□□□□□ -1.69
Nup88Q8CEC0 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Nup88Q8CEC0 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Nup88Q8CEC0 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Nup88Q8CEC0 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Nup88Q8CEC0 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Nup88Q8CEC0 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 117.7 ms