Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Mir6238-201ENSMUST00000184140 129 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm28412-201ENSMUST00000187243 177 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm29552-201ENSMUST00000190548 660 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm37550-201ENSMUST00000193230 463 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm29950-201ENSMUST00000195273 237 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm42999-201ENSMUST00000198049 786 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm18452-201ENSMUST00000202968 1111 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm43892-201ENSMUST00000204373 265 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm18160-201ENSMUST00000214279 827 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm43508-201ENSMUST00000197251 3783 ntBASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm15076-201ENSMUST00000117076 474 ntBASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm14751-201ENSMUST00000117693 222 ntBASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm13087-201ENSMUST00000118298 256 ntBASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm11260-201ENSMUST00000121163 942 ntBASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm10059-201ENSMUST00000131139 171 ntBASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm23960-201ENSMUST00000157206 131 ntBASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm23269-201ENSMUST00000178701 107 ntBASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm23379-201ENSMUST00000180026 107 ntBASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm29299-201ENSMUST00000185609 923 ntBASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm17916-202ENSMUST00000187634 1187 ntBASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm29573-201ENSMUST00000190291 919 ntBASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm28724-202ENSMUST00000194218 295 ntBASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm8774-201ENSMUST00000203621 692 ntBASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC5.05□□□□□ -1.6
Vps53Q8CCB4 AC079644.1-201ENSMUST00000220586 405 ntBASIC5.05□□□□□ -1.6
Vps53Q8CCB4 Gm46996-201ENSMUST00000220924 408 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms