Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm22019-201ENSMUST00000104359 96 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm12383-201ENSMUST00000120628 760 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm11389-201ENSMUST00000121407 430 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm14979-201ENSMUST00000121561 1035 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm13194-201ENSMUST00000142299 311 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm24745-201ENSMUST00000157840 85 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm25456-201ENSMUST00000157952 109 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm23773-201ENSMUST00000158985 296 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm16236-201ENSMUST00000159588 379 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm18604-201ENSMUST00000172535 558 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm5473-201ENSMUST00000179326 642 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm5527-201ENSMUST00000179821 642 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm27817-201ENSMUST00000184302 233 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm27942-201ENSMUST00000184669 101 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm37575-201ENSMUST00000195467 309 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm43228-201ENSMUST00000200735 264 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm43004-201ENSMUST00000201872 703 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm44688-201ENSMUST00000209083 537 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm34779-201ENSMUST00000210036 263 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm26176-201ENSMUST00000083795 105 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.38□□□□□ -1.71
Atg4aQ8C9S8 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm14795-201ENSMUST00000118461 471 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm15268-201ENSMUST00000118845 352 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm6584-201ENSMUST00000119671 447 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm13737-201ENSMUST00000119793 232 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm13471-201ENSMUST00000122057 433 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm15116-201ENSMUST00000122248 663 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm23792-201ENSMUST00000122557 93 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm22034-201ENSMUST00000157283 134 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm22310-201ENSMUST00000157509 116 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm23666-201ENSMUST00000158053 116 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm24768-201ENSMUST00000158512 94 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm22252-201ENSMUST00000179316 79 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm24969-201ENSMUST00000180331 79 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm28148-201ENSMUST00000186924 697 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm29460-201ENSMUST00000188607 714 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm37698-201ENSMUST00000192605 463 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm43892-201ENSMUST00000204373 265 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm9973-202ENSMUST00000220926 166 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm3333-202ENSMUST00000221763 1044 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 AC167669.1-201ENSMUST00000224932 384 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 AC121114.1-201ENSMUST00000228522 570 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Snora31-201ENSMUST00000083213 130 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm44527-202ENSMUST00000204519 1314 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.37□□□□□ -1.71
Atg4aQ8C9S8 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Atg4aQ8C9S8 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.36□□□□□ -1.71
Atg4aQ8C9S8 Gm43883-201ENSMUST00000204002 3750 ntBASIC4.36□□□□□ -1.71
Atg4aQ8C9S8 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Atg4aQ8C9S8 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.36□□□□□ -1.71
Atg4aQ8C9S8 Gm25537-201ENSMUST00000103851 109 ntBASIC4.36□□□□□ -1.71
Atg4aQ8C9S8 Mir669p-2-201ENSMUST00000103868 87 ntBASIC4.36□□□□□ -1.71
Atg4aQ8C9S8 Mir669p-1-201ENSMUST00000103884 87 ntBASIC4.36□□□□□ -1.71
Atg4aQ8C9S8 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Atg4aQ8C9S8 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC4.36□□□□□ -1.71
Atg4aQ8C9S8 Gm11913-201ENSMUST00000119094 336 ntBASIC4.36□□□□□ -1.71
Atg4aQ8C9S8 Gm6797-201ENSMUST00000119440 512 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms