Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm37195-201ENSMUST00000192006 3018 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm2367-201ENSMUST00000192374 472 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm37070-201ENSMUST00000193272 460 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm7652-201ENSMUST00000200440 1151 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm43282-201ENSMUST00000201848 2157 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm7838-201ENSMUST00000203221 1189 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm45777-201ENSMUST00000213009 301 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm8672-201ENSMUST00000221200 332 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm7768-201ENSMUST00000222988 597 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 AC187103.2-201ENSMUST00000223605 1617 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm26454-201ENSMUST00000082682 107 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm23055-201ENSMUST00000082805 94 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Gm37589-201ENSMUST00000193609 3994 ntBASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim47Q8C0E3 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Gm13250-201ENSMUST00000117209 753 ntBASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Gm13537-201ENSMUST00000120467 267 ntBASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Gm11384-201ENSMUST00000121376 303 ntBASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Gm13406-201ENSMUST00000121991 256 ntBASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Gm22596-201ENSMUST00000157601 316 ntBASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Gm24780-201ENSMUST00000157635 143 ntBASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Gm26489-201ENSMUST00000157880 264 ntBASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Gm24439-201ENSMUST00000157894 117 ntBASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Gm29489-201ENSMUST00000188934 324 ntBASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Gm29665-201ENSMUST00000191457 528 ntBASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Gm17766-201ENSMUST00000209223 442 ntBASIC6.11□□□□□ -1.43
Trim47Q8C0E3 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC6.11□□□□□ -1.43
Trim47Q8C0E3 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC6.11□□□□□ -1.43
Trim47Q8C0E3 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Trim47Q8C0E3 AC161884.2-201ENSMUST00000224513 227 ntBASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Gm24525-201ENSMUST00000082917 151 ntBASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Mir449a-201ENSMUST00000083641 91 ntBASIC6.11□□□□□ -1.43
Trim47Q8C0E3 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Trim47Q8C0E3 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm9700-201ENSMUST00000193786 1617 ntBASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm12074-201ENSMUST00000120189 219 ntBASIC6.1□□□□□ -1.43
Trim47Q8C0E3 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm2092-201ENSMUST00000178887 639 ntBASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm2759-201ENSMUST00000179938 639 ntBASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm18828-202ENSMUST00000181035 310 ntBASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm7656-201ENSMUST00000182468 1004 ntBASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm27148-201ENSMUST00000185086 160 ntBASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim47Q8C0E3 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms